Gene
| Gene Model ID | pfu_aug1.0_6074.1_52698 |
|---|---|
| Locus | scaffold6074.1 : 1 ... 10765 : - |
| To GenomeBrowser | scaffold6074.1:1..10765 |
| Genes list of scaffold | scaffold6074.1 |
| Synonym | pfu_aug2.0_789.1_31158 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6074.1_52698.t1 | 2 | 1 | Trypsin | 9 | 72 | 1.2e-11 | 44.6 | 1.0e-14 | 5.2e-11 | 42.5 |
| pfu_aug1.0_6074.1_52698.t1 | 1 | 1 | Ldl_recept_a | 77 | 111 | 1.1e-10 | 41.1 | 6.0e-14 | 3.0e-10 | 39.8 |
| pfu_aug1.0_6074.1_52698.t1 | 1 | 1 | MAM | 121 | 290 | 1.3e-31 | 109.5 | 3.4e-35 | 1.7e-31 | 109.1 |
| pfu_aug1.0_6074.1_52698.t1 | 2 | 2 | Trypsin | 139 | 182 | 1.2e-11 | 44.6 | 0.21 | 1000.0 | -1.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6074.1_52698.t1 | gi|196011465|ref|XP_002115596.1| | hypothetical protein TRIADDRAFT_59475 [Trichoplax adhaerens] | 3.0e-23 |
Transcript
| Transcript ID | pfu_aug1.0_6074.1_52698.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6074.1_52698.t1 atgaagctttcaagttctacaagtcttcagagtgttacgctacaggctggggatacacaagtccaggctctgggtgacag tggaggaccattacaatgtaaagataactcaggaatttggaggctggttggaatctctagttatgttgctccaaattgta gtggaaccaataaacctaatgtatttactgatgtaatgcagtacacaagctggatcagaaatgagacaaattgcactgct agcgagttttcttgtggaaatggcagatgtatagaacagaaattgacatgtgacaaaaattttgattgcttagacaaatc agatgaaggaactatctgtgagcctttgaagaatgtatcctgcgactttgattctccgtttatgtgtgggtatactgtca atgagacactcggtgaaacagactttaggtggatccgtcagaatggtccgactccatctacttttactggtccactcaat gatcacacacaaggcaactcaagtggatattacgtgtatgcagaaggtagtcatggtcaggaaggagagtatgcctatat aacgtccgttccttttactacttctgtaaatcagagtctaacattttattaccatatttacgttgaaaggccagatgttg tgaccgaaggtttggcagttgtagcaaaatataatgattctgtgagcaacgagttatggtggcggaactcgtctaccggc aatgtatggacctatgcctgtattgatcttgtaccgaacaaaaatttacagattgtttttgtagccaggaaacaaatacc gagcattgtgggtaattacgatgctgatgtggctgtggatgacgtccttctacagaaccaaatgtgtgcaggtaagattt aa |
|
Protein
| Protein ID | pfu_aug1.0_6074.1_52698.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6074.1_52698.t1 MKLSSSTSLQSVTLQAGDTQVQALGDSGGPLQCKDNSGIWRLVGISSYVAPNCSGTNKPNVFTDVMQYTSWIRNETNCTA SEFSCGNGRCIEQKLTCDKNFDCLDKSDEGTICEPLKNVSCDFDSPFMCGYTVNETLGETDFRWIRQNGPTPSTFTGPLN DHTQGNSSGYYVYAEGSHGQEGEYAYITSVPFTTSVNQSLTFYYHIYVERPDVVTEGLAVVAKYNDSVSNELWWRNSSTG NVWTYACIDLVPNKNLQIVFVARKQIPSIVGNYDADVAVDDVLLQNQMCAGKI |
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