Gene
| Gene Model ID | pfu_aug1.0_6083.1_02165 |
|---|---|
| Locus | scaffold6083.1 : 18550 ... 32445 : - |
| To GenomeBrowser | scaffold6083.1:18550..32445 |
| Genes list of scaffold | scaffold6083.1 |
| Synonym | pfu_aug2.0_666.1_21035 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6083.1_02165.t1 | 1 | 1 | Flavodoxin_2 | 43 | 159 | 3.0e-23 | 82.3 | 5.3e-26 | 2.6e-22 | 79.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6083.1_02165.t1 | gi|148886744|ref|NP_001092161.1| | NAD(P)H dehydrogenase, quinone 1 [Xenopus laevis] | 1.0e-27 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_6083.1_02165.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6083.1_02165.t1 atgaacaccgttctggcgtctaaaaaggctatcgtaaccctgcctgttttgtcaatcttattccacgtacattggcctcg tcaaaacgaggaatcttttagctatatcgttgaacagtcgaatgccgcgaagcagggtaaactgaccgaagtaattctgg cggagcagaaaaagttgaaggaagccgaccttgtcattttccagtttcctgtgtattggttctctctaccagcgattcta aaaggctggtttgacaaagttttggcaggtggtatcacacactcctatccagcgaatgttttcgaaaatggcttaatgaa gtgtagagtttcattgaaatctattgcttggtttgtgaggagttgcgaagacaagggaaagaaagctgtcctatcattta cgactggcgggtctcaagatatgtatacttcaaagggtacccatggtgacatcggtatgatactgtacccaattcaactc tcaagtgacatttcgtcaattctgcgttcagattttactttatttattgtacctgattactttaatatggcccttaaagt gcgaaatccggagtgcgaagtccaaaatcttctgtctgtgtttttcaatgcgctggctcgtccctcaccagccattgtaa agcgttatacgcagactgctgcatacaaggaaaaacctataacggttcgagtagggagccaccttaagcttcattacaaa gaaagaatggacatagaacactttgttactgatccaaaatga |
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Protein
| Protein ID | pfu_aug1.0_6083.1_02165.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6083.1_02165.t1 MNTVLASKKAIVTLPVLSILFHVHWPRQNEESFSYIVEQSNAAKQGKLTEVILAEQKKLKEADLVIFQFPVYWFSLPAIL KGWFDKVLAGGITHSYPANVFENGLMKCRVSLKSIAWFVRSCEDKGKKAVLSFTTGGSQDMYTSKGTHGDIGMILYPIQL SSDISSILRSDFTLFIVPDYFNMALKVRNPECEVQNLLSVFFNALARPSPAIVKRYTQTAAYKEKPITVRVGSHLKLHYK ERMDIEHFVTDPK |
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