Gene
| Gene Model ID | pfu_aug1.0_60898.1_41749 |
|---|---|
| Locus | scaffold60898.1 : 1 ... 1335 : - |
| To GenomeBrowser | scaffold60898.1:1..1335 |
| Genes list of scaffold | scaffold60898.1 |
| Synonym | pfu_aug2.0_658.1_27642 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_60898.1_41749.t1 | 4 | 1 | SGL | 85 | 118 | 3.4e-06 | 26.6 | 0.0025 | 12.0 | 5.1 |
| pfu_aug1.0_60898.1_41749.t1 | 5 | 1 | NHL | 87 | 106 | 5.1e-06 | 26.1 | 0.0031 | 15.0 | 5.7 |
| pfu_aug1.0_60898.1_41749.t1 | 4 | 2 | SGL | 123 | 152 | 3.4e-06 | 26.6 | 0.022 | 110.0 | 2.0 |
| pfu_aug1.0_60898.1_41749.t1 | 5 | 2 | NHL | 163 | 189 | 5.1e-06 | 26.1 | 0.0026 | 13.0 | 5.9 |
| pfu_aug1.0_60898.1_41749.t1 | 5 | 3 | NHL | 185 | 196 | 5.1e-06 | 26.1 | 0.21 | 1000.0 | -0.1 |
| pfu_aug1.0_60898.1_41749.t1 | 4 | 3 | SGL | 195 | 242 | 3.4e-06 | 26.6 | 0.0012 | 5.7 | 6.2 |
| pfu_aug1.0_60898.1_41749.t1 | 5 | 4 | NHL | 220 | 230 | 5.1e-06 | 26.1 | 0.024 | 120.0 | 2.9 |
| pfu_aug1.0_60898.1_41749.t1 | 4 | 4 | SGL | 252 | 270 | 3.4e-06 | 26.6 | 0.0006 | 3.0 | 7.1 |
| pfu_aug1.0_60898.1_41749.t1 | 5 | 5 | NHL | 252 | 267 | 5.1e-06 | 26.1 | 3.7e-06 | 0.018 | 14.9 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| mantleEdge | 1 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_60898.1_41749.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_60898.1_41749.t1 atgacagattcgaaatctgacaacgaaaataaaactcggtcttctgaaaagaataaccagactgttgacaataaaatcac acgatctttcatggctcctttttctgaaagtgtatttaacaagggtgcatctgtcatacagtatgaaaagtcaaatcatg tatggatgacaaatgtcaattcaagtacactttacttgtataactcgcaaggttcaaaggtcacctccatatatgcaggg tttaaaatctttggatttgacatggatggtaacggtgatttcatcgctactaattgcgacaacaataaagtaaagaaaat aacaaggtcgggtaaggtaaccaccatcatcagctcactaccccttggtgtatttgtgaatcacaaacaggagattgtgt tgtgtttgtatggatctgatgccttgtatgtgtactcacctgatggtcgtagactagtacgtaagataggggagggaagt gggttattcacacagccaaacagacttactcagaacggtaaccaggactactgtgtggtggatggttataagagagtggt ggtagtagatgaaggtgggtcacatagatggacgtacgacggagagcagggggaggagttaaatccggctagtatagcct gtgatggttatcagtgtctagttatctctgattgtagaaatcataagatacatctggtagataaagacggtcacttcata caggttttactgacaagggaggctgggatagaatttcctaggggagtgtgtgttgataaagatggaaagttgtgggttgg gcaaaaagataggaaagttcatgttgtcaaatataggagtaaataa |
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Protein
| Protein ID | pfu_aug1.0_60898.1_41749.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_60898.1_41749.t1 MTDSKSDNENKTRSSEKNNQTVDNKITRSFMAPFSESVFNKGASVIQYEKSNHVWMTNVNSSTLYLYNSQGSKVTSIYAG FKIFGFDMDGNGDFIATNCDNNKVKKITRSGKVTTIISSLPLGVFVNHKQEIVLCLYGSDALYVYSPDGRRLVRKIGEGS GLFTQPNRLTQNGNQDYCVVDGYKRVVVVDEGGSHRWTYDGEQGEELNPASIACDGYQCLVISDCRNHKIHLVDKDGHFI QVLLTREAGIEFPRGVCVDKDGKLWVGQKDRKVHVVKYRSK |
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