Gene
| Gene Model ID | pfu_aug1.0_609.1_15150 |
|---|---|
| Locus | scaffold609.1 : 12114 ... 26715 : - |
| To GenomeBrowser | scaffold609.1:12114..26715 |
| Genes list of scaffold | scaffold609.1 |
| Synonym | pfu_aug2.0_325.1_17291 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_609.1_15150.t1 | 3 | 1 | NOT2_3_5 | 103 | 103 | 1.9e-16 | 60.1 | 0.32 | 4700.0 | -2.7 |
| pfu_aug1.0_609.1_15150.t1 | 3 | 2 | NOT2_3_5 | 155 | 216 | 1.9e-16 | 60.1 | 5.5e-15 | 8.2e-11 | 41.9 |
| pfu_aug1.0_609.1_15150.t1 | 3 | 3 | NOT2_3_5 | 233 | 260 | 1.9e-16 | 60.1 | 9.7e-11 | 1.4e-06 | 28.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_609.1_15150.t1 | gi|260808745|ref|XP_002599167.1| | hypothetical protein BRAFLDRAFT_68754 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_609.1_15150.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_609.1_15150.t1 atggttgtatctaatagtgtggcatctagcaattctttaatttcaacatctcagtcattgacaaatagtagtaacggaaa atcacagaaccaagttgtgatgaatggacctttaagtgcaggaggcccattattaaaaggagtcagtgcaatcagttctg agtccatgtcatcattaaagtcaatagcacaacaggccgtggtaaatgcaggtttagaaaaccagattcccacccccact tcacaaacgtcaataccaacagagtcaagagttcaatttaacagttcaacaactccctcctcgagttcccagttagtagt agggccaccatcatcggtgtcgcccaccgaccaaacatcgcagcagcctcagaccacaacaatacatctcaatcctcttc tcggtatagcaccgttaggacccgtgccactcaaaacagagaatatctatcaactgtctatgttagaagctgcatatcac catttaccacatccctcagactcagagagaataaggcattacttgccacgcaattattgccctacccttccgtattaccc acaactaccccctccacattcagatacagtggaattctttcaacgactgtctacggagacactcttcttcattttctact atatggaggtcagtactcntggaaagcaagttgttgatattcaaatttgtctatttcagggcacatatatttattttgat tacgagaagtgggcccaaaggaaaaaggagggatttacgtttgagtatcggtacctggaggatcgagacttgaactaa |
|
Protein
| Protein ID | pfu_aug1.0_609.1_15150.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_609.1_15150.t1 MVVSNSVASSNSLISTSQSLTNSSNGKSQNQVVMNGPLSAGGPLLKGVSAISSESMSSLKSIAQQAVVNAGLENQIPTPT SQTSIPTESRVQFNSSTTPSSSSQLVVGPPSSVSPTDQTSQQPQTTTIHLNPLLGIAPLGPVPLKTENIYQLSMLEAAYH HLPHPSDSERIRHYLPRNYCPTLPYYPQLPPPHSDTVEFFQRLSTETLFFIFYYMEVSTXGKQVVDIQICLFQGTYIYFD YEKWAQRKKEGFTFEYRYLEDRDLN |
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