Gene
| Gene Model ID | pfu_aug1.0_60927.1_34663 |
|---|---|
| Locus | scaffold60927.1 : 22 ... 3952 : + |
| To GenomeBrowser | scaffold60927.1:22..3952 |
| Genes list of scaffold | scaffold60927.1 |
| Synonym | pfu_aug2.0_1914.1_15308 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_60927.1_34663.t1 | 1 | 1 | IMS_C | 1 | 101 | 8.7e-16 | 58.0 | 3.5e-19 | 1.7e-15 | 57.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_60927.1_34663.t1 | gi|224091441|ref|XP_002187639.1| | PREDICTED: DNA polymerase kappa, partial [Taeniopygia guttata] | 9.0e-28 |
Transcript
| Transcript ID | pfu_aug1.0_60927.1_34663.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_60927.1_34663.t1 atgagtacggaaagaacctttcgtgagatcagcacgcccatagagctttatgcaaaatgtcgtgagctaagtgaagcact ggcagaggaccttaaggaagaagaacttaagggcaagactgtgggaatcaaagtaaagactgtgaagtttgaggtgaaga cacgggtacagacattaccggagtacacctgtgatgtagacacaatattcactgctgctagggaccttctgaggatagaa atacaaaatgtggctccacaacctctcagactcaggcttatgggagtcagaatgtcaggtctcttacatcaaacaatgtg taagaaacaacaaaacaccttgacctccctcctgaagaaaatggaatctacccagcaaagtgtgtcttcatccaaatctt cagctacaagttttgtgaaaatggagggaataacagagcaaccttctgttaactgtgatgaaaacatttgtacttatgca aacgaggaaagatctttaatcgaaaagaattgtttaagtttacctgaattacccgaccaggacgcctattctgaaaatga tatgtgttacaacgaggtgaaccataacaaggagtatcataataaattgattaacgataaaacacaagatgagataggca gtaacatagatagttgtggaaatccagatcaagaggagaacacaagtgatgacccggttacatcctctacatataaggat acagtaaagcaactagatcagatagatggttcaaaacaaactgtgaaaagtgtcattggtaagagacaagagtcatccct aaagatagatacagcaggacaagagtctactcagaaagtaactccgactcagaaatttaatacaactcagaaagcaactc ctccaactcagaggctgactccaactaaagatgactctacatcaacaaaggatgatctgtcacttgaaaaggacactatg gaaaagtatgcttctgaaacttcatcaattgctttaaagtttataatgttttacttgataaatgtgaaatgtattttgaa atctatagaacttaagtcttttaaaaggatgaaagtaaatgaatgttga |
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Protein
| Protein ID | pfu_aug1.0_60927.1_34663.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_60927.1_34663.t1 MSTERTFREISTPIELYAKCRELSEALAEDLKEEELKGKTVGIKVKTVKFEVKTRVQTLPEYTCDVDTIFTAARDLLRIE IQNVAPQPLRLRLMGVRMSGLLHQTMCKKQQNTLTSLLKKMESTQQSVSSSKSSATSFVKMEGITEQPSVNCDENICTYA NEERSLIEKNCLSLPELPDQDAYSENDMCYNEVNHNKEYHNKLINDKTQDEIGSNIDSCGNPDQEENTSDDPVTSSTYKD TVKQLDQIDGSKQTVKSVIGKRQESSLKIDTAGQESTQKVTPTQKFNTTQKATPPTQRLTPTKDDSTSTKDDLSLEKDTM EKYASETSSIALKFIMFYLINVKCILKSIELKSFKRMKVNEC |
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