Gene
| Gene Model ID | pfu_aug1.0_60933.1_34664 |
|---|---|
| Locus | scaffold60933.1 : 1 ... 3954 : - |
| To GenomeBrowser | scaffold60933.1:1..3954 |
| Genes list of scaffold | scaffold60933.1 |
| Synonym | pfu_aug2.0_107.1_23478 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_60933.1_34664.t1 | 1 | 1 | tRNA_anti-codon | 1 | 76 | 3.8e-06 | 26.6 | 3.1e-10 | 4.6e-06 | 26.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_60933.1_34664.t1 | gi|225320683|dbj|BAH29737.1| | replication protein A 32 kDa subunit [Dicyema japonicum] | 1.0e-26 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_60933.1_34664.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_60933.1_34664.t1 gtaacgttagtcggactcatcacggcagtaaaggagactcccacacgtattgattatgaagtagacgacaaatcaggacc tccactagaagtcaaacattttgttgacaatgatgatgatgtacctgtagcagagagggtccagccattgagggaaaata catacgtcagagtatatgggaatgtacggtcctttggtgggaagcgaaatgtcgtagcctttaaaattctacctgtgatg gacatgaacgagattacgtatcacatgttggaggtgacatacagtcatcttgtgttgtcaaaacagtcaaatggggtagg ttcaactatgtga |
|
Protein
| Protein ID | pfu_aug1.0_60933.1_34664.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_60933.1_34664.t1 VTLVGLITAVKETPTRIDYEVDDKSGPPLEVKHFVDNDDDVPVAERVQPLRENTYVRVYGNVRSFGGKRNVVAFKILPVM DMNEITYHMLEVTYSHLVLSKQSNGVGSTM |
|