Gene
| Gene Model ID | pfu_aug1.0_6097.1_16843 |
|---|---|
| Locus | scaffold6097.1 : 34123 ... 43145 : - |
| To GenomeBrowser | scaffold6097.1:34123..43145 |
| Genes list of scaffold | scaffold6097.1 |
| Synonym | pfu_aug2.0_228.1_27073 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6097.1_16843.t1 | 1 | 1 | DUF2043 | 178 | 253 | 1.6e-23 | 82.8 | 3.0e-27 | 4.4e-23 | 81.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6097.1_16843.t1 | gi|332818919|ref|XP_003339104.1| | PREDICTED: UV-stimulated scaffold protein A isoform X1 [Pan troglodytes] | 2.0e-37 |
Transcript
| Transcript ID | pfu_aug1.0_6097.1_16843.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6097.1_16843.t1 atggtggaggacatgaaatccagcctgatggaaattaaaaacagttttgaattacttcttccaacgttagataacttttt catcggaagtattgacattgatgcatcttcttctgcacaaacagaaaatgacggttatgataaagatgccgagtctataa atagtgacacaaaaactacagtaaagtcacctgagtgtagagactgtcagaaaaatatgtctgaaaaaggtaaaacagaa ataggtgaaaccttgaaatgtgagacatcagcaaaatgtcacacagagaaatcaagagatagtgatgtaaacagtagtgt catgcatactccaaatggacatgatgatagtctgaaacaagatgattcatcaatagatgatgatgaagaagatgatgagg aggagaaggattttgaagatgttgcagacgaaatgtctagacaacactttatgcagattctgtctaagcatggtggtagt cagacagatgttaagaaggcaatttaccttaaaacagaactcacccaggccaaaaacaagtatcatgaccttaaagtcat tccagaggaagagaaggtcgtcgataaaggtattgcagagatgaccaagagagccatatcattcacagggaagtttgagc cggtaaagtggaaatgtcgagcacctctacccaatggcaagctatgtgagagaatggacagggtcaagtgtcctttccat ggtaagatagtccctcgagataaaatcggaaatccaaacgatccaaaccagccaccacaacccctgactgccgaacagga agtcaaagatcttataccagcctggcaggatccagaactccaggctgacattgaagcagccactggccttgaccttggat cagggaggtcaaagggtaaaggtaaaggcaaggggaaaggaaagggcaaaggtaaagggaagcaacccaagtatccaaac cttaccaacatcaaggcggtcacaaatactgcaagatcaagactggaaaacaaagtattcaacagaggtctcgggaacca gacaaggtcttcggaactagacaagaggtctcaggaaccagactacgaatatcgtctctcataa |
|
Protein
| Protein ID | pfu_aug1.0_6097.1_16843.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6097.1_16843.t1 MVEDMKSSLMEIKNSFELLLPTLDNFFIGSIDIDASSSAQTENDGYDKDAESINSDTKTTVKSPECRDCQKNMSEKGKTE IGETLKCETSAKCHTEKSRDSDVNSSVMHTPNGHDDSLKQDDSSIDDDEEDDEEEKDFEDVADEMSRQHFMQILSKHGGS QTDVKKAIYLKTELTQAKNKYHDLKVIPEEEKVVDKGIAEMTKRAISFTGKFEPVKWKCRAPLPNGKLCERMDRVKCPFH GKIVPRDKIGNPNDPNQPPQPLTAEQEVKDLIPAWQDPELQADIEAATGLDLGSGRSKGKGKGKGKGKGKGKGKQPKYPN LTNIKAVTNTARSRLENKVFNRGLGNQTRSSELDKRSQEPDYEYRLS |
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