Gene
| Gene Model ID | pfu_aug1.0_610.1_15158 |
|---|---|
| Locus | scaffold610.1 : 65666 ... 87725 : - |
| To GenomeBrowser | scaffold610.1:65666..87725 |
| Genes list of scaffold | scaffold610.1 |
| Synonym | pfu_aug2.0_10522.1_09774 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_610.1_15158.t1 | 1 | 1 | AAA | 213 | 268 | 2.3e-09 | 37.5 | 6.5e-13 | 4.8e-09 | 36.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_610.1_15158.t1 | gi|47208099|emb|CAF91931.1| | unnamed protein product, partial [Tetraodon nigroviridis] | 6.0e-21 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_610.1_15158.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_610.1_15158.t1 atgtacctttacgtcgataagatacgtatcgtcggggtgtatcgatacttggatcgcgaaataaaatatcgcggtgcatc gatgcatcggagtatcgtcccagccctacagtctcctcagattaatcactaaagtcagaaatggaaatcttcacttactt ctgaacaatgtaagaagaaagattggtttcaaaagatcttaaagagaagccaggaatcctcaaatcgtcttcttcctcaa gacaaacagaataccgtcctgataagatcagaaaatgactctaacatggcaaacggccattctttgccgaaacaaaatgt cacagagacaattacacctagagacccatcaagtatcagtagaattcaaagtatgatgaggaatgacagacctgttcaac ctcacattgccaacaatatggaggaatttagaagttacccagaagtcaaagctccagaaaacttcccatcattccctagt catggtggtggacctagagaagatttcaaaaggaagccattgtttgccaacagtggtcccagtaacaacatttcagtgga aagcaatgctaataatttcggctacaacaacagcagtaatggaccacaacatggacagcaaggtctatacaggaaaagtg aggtaggtgaagcagagaagatggtacgagccatgtttgccgttgcgagatgttaccagcctgctgtagtgtttatagat gagatagactcactgctgtctcaaagaacggacggtgaacatgaagcatctcggagaattaagacagaattccttgttca actggttcgtcctatattgtttgaggactttgacgcagccttcatgcaagtgagagccagcgtatctgacaaagacttag atctatatatagattggaacaatacgtatggaagtgtccctatccggaaataa |
|
Protein
| Protein ID | pfu_aug1.0_610.1_15158.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_610.1_15158.t1 MYLYVDKIRIVGVYRYLDREIKYRGASMHRSIVPALQSPQINHXSQKWKSSLTSEQCKKKDWFQKILKRSQESSNRLLPQ DKQNTVLIRSENDSNMANGHSLPKQNVTETITPRDPSSISRIQSMMRNDRPVQPHIANNMEEFRSYPEVKAPENFPSFPS HGGGPREDFKRKPLFANSGPSNNISVESNANNFGYNNSSNGPQHGQQGLYRKSEVGEAEKMVRAMFAVARCYQPAVVFID EIDSLLSQRTDGEHEASRRIKTEFLVQLVRPILFEDFDAAFMQVRASVSDKDLDLYIDWNNTYGSVPIRK |
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