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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_6103.1_09283
Locus scaffold6103.1 : 39603 ... 62175 : -
To GenomeBrowser scaffold6103.1:39603..62175
Genes list of scaffold scaffold6103.1
Synonym pfu_aug2.0_480.1_00802

Manual annotation
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
trochophore 2
>Adult tissues
Dshape 1
mantle 1

Transcript
Transcript IDpfu_aug1.0_6103.1_09283.t1
Definition-
>pfu_aug1.0_6103.1_09283.t1
atgaccttagtacgtatagttgcccctgaattgggtcgtctgctatccacgtaccagctgatcccgtcgttccagtacag
tccagaactccattgttatgtcgatgaccttcagaaatcaaaaggtctaccccctcccgccccggccactaccaagaaac
atgaggtcttcgatccaagtcagtacagtaaagtcgacgaacgtgctttgaaggctccctcgaaacttctgaagcagcct
ctcagtaacctagtagaatatctgacggagggtgtggacgacgatttgtcaaagatccgggcaatttacagatgggtcac
tgcgcagcccgtggattccatgaaaatccccaatcgtgaacctgcgcagtcgcacacgctatatcagctatggcgcattc
gccaccggaaggggaactacgctcagctgattagtctcctttgcagatttgcacaactaccatgcatcataatccacggt
aaactcaaaggatccacgtatgaagtgggagagacactggacgaggaacaacactacggagagtggaacgccgtgctggt
ggacggacaatggcgattcatcaatgcttactggggcacatgcgcagaaggaggccaggacgagtccaattgggaagtta
tagagaggggtgacagcgagaagaacagtgatgtgctcaacaagcagttgttttactcgtgtgacgagaattactttttg
accgaccccgagcaaatgatcagcactcaccttcccagcgaggcaaaatggcagctacgtgatcaacaagtcacagagga
cgacttcacggaaaatgccttccttaaggatagatactttaatatgaatctcaatctgctcaaacccaagaaatgtgtca
tacagtgtgaaaacgagacagaaattcagtttgatatgccgagggaaagatccttaaactttgactttcagtatctgctt
ttcagattaaaacgagcgcaaggaaatttgccaaggtacgaccgctttgtattccttcatagactgaatgacgaaaaatt
gagcatacgaatccgttccccggttgcagacacgttcagatttgaagtagttggtaaggacgtttcagtttcggatccaa
catacgattatgattggatagctatttataaaattgtgttcggtcaggataatgatgagtgtgagccgttcccggaatgt
cccatcattggatggggaccgggaagagcggctgtagaatgtggacttgcccccatgagtcactttgcaggggaaattaa
gcagaaaaaagatgatagtggtaaatttgaagttcgtttctccacaacaagcgacaaagattggagccggatgcagattc
agggagagttaatagaaggagggtcttctggaaaagtaattccggatcacgtcattcaccgtgtagaagatggtgacgtc
atattccatgtgaacactcccaagtcaggagaatatgccttgaaaatgtatgcaaaaggtgaaagagacaaagaggcgaa
gaatttttgtaattatctcatatcgtcagaccaaaaggaacacaatccggcatttcctagaggttttcaagatggtattg
gagctaagccggcatttgacaagttaggacttcgggcattgtcacatccatctggttatatagacactgacgaagaagtt
ttagaactgaaatttgaaaaaccggaaggagttgaaatttcactgagcttgtccggaaactcaatccgaccggaaatggc
caaacgcttggtagaggaagaaattgagggaaacgttgtgacatataaagtacggctgcctagcaacggtagttatggag
tcaaaataatggccaatcagggaagaggaaatgtgaatgcgtttgattatgttgtcaactataaaaagaatttgaagaaa
aagacgcacaaacagccagaatccaaacccgcagcacaagaacgagcaccgtcacctccagcacctgtacattctgtgga
tcctcgcattatggaaatcagggaggcaatgaagagggcagtgaaagaacagaatgagactgacctcgaactggccttag
atgacctcaagaatatcggcatagcaacggtcaaacaagacatcgagtatggcgataacgaactcaacgttatgcgttgt
aggcgtgaactgaacgaagctgttgaaatgcgtgatatcgatgaaattaaaaaggctatacagaaaaccaagaatctggg
tgtagaggggcgtctccccgacgaggtagtcaaggcgaggtccatgctggagcgtctaaggaacatagccaagctgatgc
atgctgtactggcactggatcaaaccactattgctgaaatcaaaggctattcgaacccaccacccgccgttcacagggtt
atgatggctacgctgctgattctaggtcactgggaggaagagacggaggactggaaaaaagtacaaattattcttggaaa
gattggaaaagagtctattaaacggaaactccagatgttgaaagtagaagcaatacccctggaaatagctctcggagcgc
gtgatctcattcgagatttcactttggatcaggtgcgcatggtcagtgctggtggcgccaccttctatgtctgggtgcgt
ggtctgacggaggaaatagagaagcgtaatgtagaactgatcggaaccgttcgtccacgaacaagcaaacggagaaggga
gtctcataaaacgactttagaacatctataa

Protein
Protein IDpfu_aug1.0_6103.1_09283.t1
Definition-
>pfu_aug1.0_6103.1_09283.t1
MTLVRIVAPELGRLLSTYQLIPSFQYSPELHCYVDDLQKSKGLPPPAPATTKKHEVFDPSQYSKVDERALKAPSKLLKQP
LSNLVEYLTEGVDDDLSKIRAIYRWVTAQPVDSMKIPNREPAQSHTLYQLWRIRHRKGNYAQLISLLCRFAQLPCIIIHG
KLKGSTYEVGETLDEEQHYGEWNAVLVDGQWRFINAYWGTCAEGGQDESNWEVIERGDSEKNSDVLNKQLFYSCDENYFL
TDPEQMISTHLPSEAKWQLRDQQVTEDDFTENAFLKDRYFNMNLNLLKPKKCVIQCENETEIQFDMPRERSLNFDFQYLL
FRLKRAQGNLPRYDRFVFLHRLNDEKLSIRIRSPVADTFRFEVVGKDVSVSDPTYDYDWIAIYKIVFGQDNDECEPFPEC
PIIGWGPGRAAVECGLAPMSHFAGEIKQKKDDSGKFEVRFSTTSDKDWSRMQIQGELIEGGSSGKVIPDHVIHRVEDGDV
IFHVNTPKSGEYALKMYAKGERDKEAKNFCNYLISSDQKEHNPAFPRGFQDGIGAKPAFDKLGLRALSHPSGYIDTDEEV
LELKFEKPEGVEISLSLSGNSIRPEMAKRLVEEEIEGNVVTYKVRLPSNGSYGVKIMANQGRGNVNAFDYVVNYKKNLKK
KTHKQPESKPAAQERAPSPPAPVHSVDPRIMEIREAMKRAVKEQNETDLELALDDLKNIGIATVKQDIEYGDNELNVMRC
RRELNEAVEMRDIDEIKKAIQKTKNLGVEGRLPDEVVKARSMLERLRNIAKLMHAVLALDQTTIAEIKGYSNPPPAVHRV
MMATLLILGHWEEETEDWKKVQIILGKIGKESIKRKLQMLKVEAIPLEIALGARDLIRDFTLDQVRMVSAGGATFYVWVR
GLTEEIEKRNVELIGTVRPRTSKRRRESHKTTLEHL

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