Gene
| Gene Model ID | pfu_aug1.0_6107.1_16849 |
|---|---|
| Locus | scaffold6107.1 : 1 ... 5233 : + |
| To GenomeBrowser | scaffold6107.1:1..5233 |
| Genes list of scaffold | scaffold6107.1 |
| Synonym | pfu_aug2.0_1092.1_08161 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6107.1_16849.t1 | 1 | 1 | PAF-AH_p_II | 2 | 186 | 0.0 | 179.3 | 0.0 | 0.0 | 178.4 |
| pfu_aug1.0_6107.1_16849.t1 | 1 | 1 | Abhydrolase_5 | 21 | 185 | 3.6e-12 | 46.2 | 5.0e-15 | 5.7e-12 | 45.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6107.1_16849.t1 | gi|56207568|emb|CAI21135.1| | 6.0e-37 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_6107.1_16849.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6107.1_16849.t1 gtgatgtgtacgtgccggcactatggcagggtccgatctgtccgtccaacaacaaatttcctgttgttatattttcccat ggccttggtgggaaccgaactgttaacaccacgatctgctgtgagctggcttcacaggggttcatcgttgctgcagtaga gcatagagatggttctgcgtcgatgacgtatcaccttaaagagaacatagatagaaacagtgtgatggagatagacgaag ataattcaccacgtagacacaccattcacagaacacatttgtactcagaaaactggatcccttaccaaaggatagaacct ctagacgattttcaatttagaaataagcaggttcatcacagagcggaggaatgtatcaaggcactagacgtcctgtttgc ccttaacaatggcgacgaagttcataattctatgcttggtgctcattttaatataaaacaatttgttaaccgtttagact tgtctcgtgtatctgtgatgggccattcatttggaggatcaaccagtctgtgtacactctctagggatcaaagattcaag taa |
|
Protein
| Protein ID | pfu_aug1.0_6107.1_16849.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6107.1_16849.t1 DVYVPALWQGPICPSNNKFPVVIFSHGLGGNRTVNTTICCELASQGFIVAAVEHRDGSASMTYHLKENIDRNSVMEIDED NSPRRHTIHRTHLYSENWIPYQRIEPLDDFQFRNKQVHHRAEECIKALDVLFALNNGDEVHNSMLGAHFNIKQFVNRLDL SRVSVMGHSFGGSTSLCTLSRDQRFK |
|