Gene
| Gene Model ID | pfu_aug1.0_6107.1_16852 |
|---|---|
| Locus | scaffold6107.1 : 40366 ... 50700 : + |
| To GenomeBrowser | scaffold6107.1:40366..50700 |
| Genes list of scaffold | scaffold6107.1 |
| Synonym | pfu_aug2.0_5370.1_02737 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6107.1_16852.t1 | 1 | 1 | RVT_1 | 652 | 777 | 2.4e-11 | 43.3 | 1.6e-14 | 4.7e-11 | 42.4 |
Transcript
| Transcript ID | pfu_aug1.0_6107.1_16852.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6107.1_16852.t1 atggctgagaataacaataacgttactaactccgagctcgtaatgctcaagcctatgcgtagtagaagaatgcgtcagcc taaaatctgctacacaccgagtaaatacaatcatactagcagtagcattgttgcacgcaatatcaacactgttgcatata cattaaatgaggagaaagcaatttataagaagattgacgctgcacacaggcaacatatggtggacgttgagcttaaatct ggaacgtacgtattgtcattcaatgctgctgcatatgaaatatttcgcaagaacttatctacgcttttagatcagcagac tgatcgtaccgtacatgtatatagcaaacaaggtaaaggaccgtctgctcctattgtggaggactcgatgtcggtctgtg atagaaaatctggaaaacagctgtttcgcataaatatgtttcacacaacttgcaaagcggatatcaatggaaagcatctt gatgatttcattaacaatgacctaccgaaattgattgattctcttgatatacctgatattgcgaagctgaacaagcattt agtggacaagtgtgaagaatatctcaaattaagggaaagcaaatgtaaaaactgtaaaaagagatgtatcagcagtgcta cacaatgccatctgtgtggctcatggacccactacaaatgtgccaaacttgcaaaggatacgataaatgctctggaaaat actgatttagagtttgcgtgtcaagaatgcgatatagcaagatttcacatccaggataccaccacaagcttatccaaact aaatgcgatgatggcatgccagaataatcaaaatgtatctattgcacaggatatattggaagatgagactaaggcaaaat gtgacatctgtatgaatgcgaatacaaaaccaacgctagtgtgtgaccgctgctcaaacgtatgtcatgatcaatgtgca attgaaatcaacgacgaacttatctgtcacgcatgcgccggtactcaacttatgagcgaagttaataacacgtccactcg taaaaccgacgcacacattgttgttgggagaaccgaagtgctaatatccgatagaaatagccagcatgtaactccccaga ctatggctaaagaaatttgtagttcggttactgtaagtgatgcctcgtctgtaaatgacattaatacgctactagtgcga ccagagttgtccgatgataaatcccatacatcggcgcttggtaaaaaagatgcaaatccgactcgccctgaggtagcaag catcaaaacaggaacaacaaatgataaacagaagcaattgacattaagatctcaagaccttagaaataaggaagagaaac ttagaaaaaaagaagaagagcttaaaaaacgacaatatactattgatactgctgagaagaaacaaaagcagttagaaacc tatcatgttgaaagtgttgaaactagaaacgtcgagcttgaaaaaacaattaggatcttaagacgacgagtatctatact ggaaagtgaaaaggatgtgactgatgagcacgataacgcgacacaaagtcagcaatcgaaaacagaggatcagcattata caggcactgaccaacttattcttggtgtccgtgacaaactagctataccaactgattgtgagaagtgtgataaagtctat attgagcatacaaaacatgacaccgacatcattaaggatatctgcattagtgactccactccgatacagccagcagagac tgaggagatttcacatgctcttggtatgctcaacacgggtaaagctccagacctatacggtgtaaccgttgagcacctat tatacgcaggagacccgatggtcacaattctaacaatgttacttaatgctatctttagtctggctcttgtaccaaatgtc ttgaagtatggagccattactccagtttttaagaagaaagggagtgttactgatgctagaaactatcgtggtatcactgt gcttcctgtgattgggaaactattagaaattttgataagaaataggatacggaagatattggaaccaattcaaaacccta tgcagcgtggatttactagaaatgcatctccgctttattgtgctctgataattgaagagttcatcagagaatccttagca aacaaggacccagtatactctgcttatcttgatgcaaggactgcatttgacgttgtgaaccacaacagcctactgcggaa acttttcaatgctgggattgaagggaagctatggtctattattcaggattttcacactaatgctgttagtgttgtgaaat gggagggtgctgtttcttcaccattcaatatccaccaaggggtccgtaatatggaaaaatggttgggcaacagtttggta cgacttcgttgtgtaacaaccatattggggttcagtcttttaagcggcagcgaagagactggattcgagtatgcaacaca cagcaagtaa |
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Protein
| Protein ID | pfu_aug1.0_6107.1_16852.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6107.1_16852.t1 MAENNNNVTNSELVMLKPMRSRRMRQPKICYTPSKYNHTSSSIVARNINTVAYTLNEEKAIYKKIDAAHRQHMVDVELKS GTYVLSFNAAAYEIFRKNLSTLLDQQTDRTVHVYSKQGKGPSAPIVEDSMSVCDRKSGKQLFRINMFHTTCKADINGKHL DDFINNDLPKLIDSLDIPDIAKLNKHLVDKCEEYLKLRESKCKNCKKRCISSATQCHLCGSWTHYKCAKLAKDTINALEN TDLEFACQECDIARFHIQDTTTSLSKLNAMMACQNNQNVSIAQDILEDETKAKCDICMNANTKPTLVCDRCSNVCHDQCA IEINDELICHACAGTQLMSEVNNTSTRKTDAHIVVGRTEVLISDRNSQHVTPQTMAKEICSSVTVSDASSVNDINTLLVR PELSDDKSHTSALGKKDANPTRPEVASIKTGTTNDKQKQLTLRSQDLRNKEEKLRKKEEELKKRQYTIDTAEKKQKQLET YHVESVETRNVELEKTIRILRRRVSILESEKDVTDEHDNATQSQQSKTEDQHYTGTDQLILGVRDKLAIPTDCEKCDKVY IEHTKHDTDIIKDICISDSTPIQPAETEEISHALGMLNTGKAPDLYGVTVEHLLYAGDPMVTILTMLLNAIFSLALVPNV LKYGAITPVFKKKGSVTDARNYRGITVLPVIGKLLEILIRNRIRKILEPIQNPMQRGFTRNASPLYCALIIEEFIRESLA NKDPVYSAYLDARTAFDVVNHNSLLRKLFNAGIEGKLWSIIQDFHTNAVSVVKWEGAVSSPFNIHQGVRNMEKWLGNSLV RLRCVTTILGFSLLSGSEETGFEYATHSK |
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