Gene
| Gene Model ID | pfu_aug1.0_6114.1_59939 |
|---|---|
| Locus | scaffold6114.1 : 19246 ... 30768 : + |
| To GenomeBrowser | scaffold6114.1:19246..30768 |
| Genes list of scaffold | scaffold6114.1 |
| Synonym | pfu_aug2.0_1326.1_21546 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6114.1_59939.t1 | 1 | 1 | Polyketide_cyc | 83 | 210 | 2.2e-23 | 82.6 | 1.9e-27 | 2.9e-23 | 82.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6114.1_59939.t1 | gi|90111995|sp|Q3THF9.1|CQ10B_MOUSE | Coenzyme Q-binding protein COQ10 homolog B, mitochondrial | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-4cell | 2 |
| 8-16cell | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_6114.1_59939.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6114.1_59939.t1 atggcggcggtcaggcgatttaatcatactggtaggggagttttgaagtgtataaaaaagacaaatgaaaacaaaaagat aataaacagaggatgtattctataccatgtcccacagtcacatgttgtggtcccccaccaaacactacagacctctcagc catgcagtgggctgttcaacatccccaagccaattaatcccctcgccaagggcaaaagacaggagtattcagagaggcgg atactgggatacagcatggaccaaatgtacgagattgtttcggatgtagaactttacaaggaatttgtaccgtggtgtaa ggactctatggtttttaacaggagacctaaccatctcaaatgtaaattggaagtgggatttcctccattattagaacgat atacatcattagttacgttagcaagaccaaatctcgtgaagtcagaatgcacggaaggtaaactttttaaccacatgctg acaatatggcgattcagtccagggttgccgggacaacctaacacctgtacattagatttctcaatttcgtttgaattccg ctatgctatacacagtcagatgagcacgatgttctttgatcaagttgtaaagacaatggtttccgcattcttaaaacgtg ctaaaaaagtgtacggacccgaatccatgaaaagtcgacaaatcaatgtacgcatggtaacgacttga |
|
Protein
| Protein ID | pfu_aug1.0_6114.1_59939.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6114.1_59939.t1 MAAVRRFNHTGRGVLKCIKKTNENKKIINRGCILYHVPQSHVVVPHQTLQTSQPCSGLFNIPKPINPLAKGKRQEYSERR ILGYSMDQMYEIVSDVELYKEFVPWCKDSMVFNRRPNHLKCKLEVGFPPLLERYTSLVTLARPNLVKSECTEGKLFNHML TIWRFSPGLPGQPNTCTLDFSISFEFRYAIHSQMSTMFFDQVVKTMVSAFLKRAKKVYGPESMKSRQINVRMVTT |
|