Gene
| Gene Model ID | pfu_aug1.0_6126.1_45349 |
|---|---|
| Locus | scaffold6126.1 : 586 ... 15195 : - |
| To GenomeBrowser | scaffold6126.1:586..15195 |
| Genes list of scaffold | scaffold6126.1 |
| Synonym | pfu_aug2.0_1665.1_18458 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6126.1_45349.t1 | 2 | 1 | CAP_GLY | 122 | 184 | 2.9e-22 | 78.1 | 8.8e-16 | 6.5e-12 | 44.9 |
| pfu_aug1.0_6126.1_45349.t1 | 2 | 2 | CAP_GLY | 228 | 287 | 2.9e-22 | 78.1 | 2.3e-11 | 1.7e-07 | 30.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6126.1_45349.t1 | gi|260810165|ref|XP_002599874.1| | hypothetical protein BRAFLDRAFT_230143 [Branchiostoma floridae] | 7.0e-37 |
Transcript
| Transcript ID | pfu_aug1.0_6126.1_45349.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6126.1_45349.t1 atgtcaaaccagaatgatagttactatattctgctaaaagagaagatcgggaagaagaaagagaaaggaattcttcgtac aacttcttcaaaagtagaaattttaccgggaactcttctgtgtttaatcgacgaggaaactcgggattcgagaataatat gggtattggaaaccgtcgattctgataataatcacgtggaagtgtcgtgtgctccaaatgatacgggacagttgacttat aacgaattcagactcctgttacctattccagtatgtcaagaaagactgagtatttttcaagatcagaactggctaaaaga gggggcaagtttgatcgaaggagaacatgtattagtatcgctgaaaggtctaccggacttacccggtacaattagataca aaggagaactgccgtctagtaaagggattcagtttggtgttgaattagcaccggaacacagaggaaaaggaacttgtgat ggagtattccgtaagaaacgtttcttcacttgtgataccaacagtgcggtgtttgtggccatccacaaactacggaaaga tgttatgttttcctcacagcatagacacttggagcagaacgtctaccaaacacctcacatagacaatgacgagaggaaaa tgatcgaccagtctggtttacgaatagacaatagaatcgtttggcttagcgacaatggtcctgagtttggggtggttaag tggatcggaatcctcccagacactcatcgtagggatgtcactgtaggggtagaatttgacaatccagttggctcaggaac aggcaaatacaagaaccatcgtttatttttcgccaagccccaacatgcctcactggtaccgatcctcgggctgatgaagg cctcggagtatctgcagtccatgggagcgactaacgagagctatcctgagccagaaattgaaatgcatcctccccctgtt ataccttcacatctacaacccactcctgtgaatcgtataacaaaagaggatttacctgaatatgaagatgtcaaacaggt tctgaaggaaggcattgttaatcctctaagaaggtataactatgtgcgagcagacaaagtgatgaaacttagacatctgc ttgataagcttggaaatataccgggaatgatgaatgaagaaaaagattctcttgatgttgaaatgattgtgaaaaacgtt tgtgggaagcagaagggtattcagggtcaccataactcttgttacctggatgctacattgtttgcaatgttttattttac gactgtttttgacggtattttatatcgtcccagaacaaaagaggatttacctgaatatgaggatgtcaaacaggttctga aggaaggcattgttaatcctctaagaaggtataactatgtgcgagcagacaaagtgatgaaacttagacatctgcttgat aagcttggaaatataccgggaatgatgaatgaagaaaaaggtaatagatttgctaaaaagtag |
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Protein
| Protein ID | pfu_aug1.0_6126.1_45349.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6126.1_45349.t1 MSNQNDSYYILLKEKIGKKKEKGILRTTSSKVEILPGTLLCLIDEETRDSRIIWVLETVDSDNNHVEVSCAPNDTGQLTY NEFRLLLPIPVCQERLSIFQDQNWLKEGASLIEGEHVLVSLKGLPDLPGTIRYKGELPSSKGIQFGVELAPEHRGKGTCD GVFRKKRFFTCDTNSAVFVAIHKLRKDVMFSSQHRHLEQNVYQTPHIDNDERKMIDQSGLRIDNRIVWLSDNGPEFGVVK WIGILPDTHRRDVTVGVEFDNPVGSGTGKYKNHRLFFAKPQHASLVPILGLMKASEYLQSMGATNESYPEPEIEMHPPPV IPSHLQPTPVNRITKEDLPEYEDVKQVLKEGIVNPLRRYNYVRADKVMKLRHLLDKLGNIPGMMNEEKDSLDVEMIVKNV CGKQKGIQGHHNSCYLDATLFAMFYFTTVFDGILYRPRTKEDLPEYEDVKQVLKEGIVNPLRRYNYVRADKVMKLRHLLD KLGNIPGMMNEEKGNRFAKK |
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