Gene
| Gene Model ID | pfu_aug1.0_6126.1_45350 |
|---|---|
| Locus | scaffold6126.1 : 16326 ... 34972 : + |
| To GenomeBrowser | scaffold6126.1:16326..34972 |
| Genes list of scaffold | scaffold6126.1 |
| Synonym | pfu_aug2.0_2106.1_21935 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6126.1_45350.t1 | 2 | 1 | PCIF1_WW | 162 | 223 | 1.6e-26 | 92.6 | 2.7e-30 | 4.0e-26 | 91.3 |
| pfu_aug1.0_6126.1_45350.t1 | 2 | 2 | PCIF1_WW | 224 | 241 | 1.6e-26 | 92.6 | 0.035 | 530.0 | -0.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6126.1_45350.t1 | gi|297259686|ref|XP_001105396.2| | PREDICTED: phosphorylated CTD-interacting factor 1-like isoform 2 [Macaca mulatta] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_6126.1_45350.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6126.1_45350.t1 atggaaatttccgaaacagtatatgaggaaaaattacctacgatgaaattaaggaattttgatagcttcaaaaacttcaa tatagcaagaactgacatcaaagacataccgacaggaattgatgccccagtggaatcatttaatcgttggcttttggaaa ggaaagtttgtgataagggaatcgattcaatgttaccgtcggcatgtgcacgggaagtctcaccgtcaatgtaccgggaa attatgaacgatataccagtcaaacttgtcaaacctaaatattcgggggatgcaaggaaacagctcttcaagtatgcaga ggcagcgaagaagatgattgaaaccagaccttatgatagtaattccttgaataatttatttccattcctttttgtcctca caccagagcaaatctttggttctcttcgaaatgaattattattttattattacaaagaatattatcaagtacatatttct atgacattatttggtttatcagagaatgaaggaagtggattacaaggagctcttcctatatctgtgtttgagtgtttaca tcgtgtgtttggtgtgacatttgagtgttttgcgtctccgttgaactgttattacagacagtattgttcggcattttcag ataccgatggatattttggatccagagggtttaaaaggaagcaggtggtgttgtctgcatatgaacatgagtataggaac ggattccagcatgttagttcgaaattgacatattga |
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Protein
| Protein ID | pfu_aug1.0_6126.1_45350.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6126.1_45350.t1 MEISETVYEEKLPTMKLRNFDSFKNFNIARTDIKDIPTGIDAPVESFNRWLLERKVCDKGIDSMLPSACAREVSPSMYRE IMNDIPVKLVKPKYSGDARKQLFKYAEAAKKMIETRPYDSNSLNNLFPFLFVLTPEQIFGSLRNELLFYYYKEYYQVHIS MTLFGLSENEGSGLQGALPISVFECLHRVFGVTFECFASPLNCYYRQYCSAFSDTDGYFGSRGFKRKQVVLSAYEHEYRN GFQHVSSKLTY |
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