Gene
| Gene Model ID | pfu_aug1.0_61308.1_34673 |
|---|---|
| Locus | scaffold61308.1 : 1 ... 3944 : - |
| To GenomeBrowser | scaffold61308.1:1..3944 |
| Genes list of scaffold | scaffold61308.1 |
| Synonym | pfu_aug2.0_862.1_07961 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_61308.1_34673.t1 | 9 | 1 | zf-H2C2_2 | 2 | 23 | 2.4e-12 | 46.4 | 0.00035 | 0.57 | 10.5 |
| pfu_aug1.0_61308.1_34673.t1 | 9 | 1 | zf-C2H2 | 12 | 35 | 1.0e-21 | 75.8 | 0.00033 | 0.55 | 10.6 |
| pfu_aug1.0_61308.1_34673.t1 | 8 | 1 | zf-C2H2_4 | 12 | 35 | 5.0e-17 | 60.8 | 0.0017 | 2.8 | 8.4 |
| pfu_aug1.0_61308.1_34673.t1 | 8 | 1 | zf-C2H2_jaz | 12 | 23 | 2.1e-06 | 27.6 | 0.0024 | 4.0 | 7.7 |
| pfu_aug1.0_61308.1_34673.t1 | 9 | 2 | zf-H2C2_2 | 30 | 53 | 2.4e-12 | 46.4 | 0.039 | 65.0 | 4.0 |
| pfu_aug1.0_61308.1_34673.t1 | 9 | 2 | zf-C2H2 | 44 | 66 | 1.0e-21 | 75.8 | 4.1e-05 | 0.068 | 13.5 |
| pfu_aug1.0_61308.1_34673.t1 | 8 | 2 | zf-C2H2_4 | 44 | 67 | 5.0e-17 | 60.8 | 2.1e-05 | 0.034 | 14.4 |
| pfu_aug1.0_61308.1_34673.t1 | 9 | 3 | zf-H2C2_2 | 69 | 86 | 2.4e-12 | 46.4 | 0.0068 | 11.0 | 6.4 |
| pfu_aug1.0_61308.1_34673.t1 | 9 | 3 | zf-C2H2 | 76 | 98 | 1.0e-21 | 75.8 | 9.9e-05 | 0.16 | 12.3 |
| pfu_aug1.0_61308.1_34673.t1 | 8 | 3 | zf-C2H2_4 | 77 | 95 | 5.0e-17 | 60.8 | 0.00044 | 0.73 | 10.3 |
| pfu_aug1.0_61308.1_34673.t1 | 8 | 2 | zf-C2H2_jaz | 77 | 93 | 2.1e-06 | 27.6 | 0.032 | 53.0 | 4.1 |
| pfu_aug1.0_61308.1_34673.t1 | 9 | 4 | zf-H2C2_2 | 90 | 116 | 2.4e-12 | 46.4 | 0.00066 | 1.1 | 9.6 |
| pfu_aug1.0_61308.1_34673.t1 | 9 | 4 | zf-C2H2 | 106 | 127 | 1.0e-21 | 75.8 | 0.0062 | 10.0 | 6.7 |
| pfu_aug1.0_61308.1_34673.t1 | 8 | 4 | zf-C2H2_4 | 106 | 127 | 5.0e-17 | 60.8 | 3.6e-05 | 0.059 | 13.7 |
| pfu_aug1.0_61308.1_34673.t1 | 8 | 3 | zf-C2H2_jaz | 106 | 123 | 2.1e-06 | 27.6 | 3.0e-05 | 0.049 | 13.7 |
| pfu_aug1.0_61308.1_34673.t1 | 9 | 5 | zf-H2C2_2 | 122 | 143 | 2.4e-12 | 46.4 | 0.0019 | 3.1 | 8.2 |
| pfu_aug1.0_61308.1_34673.t1 | 9 | 5 | zf-C2H2 | 132 | 150 | 1.0e-21 | 75.8 | 3.7e-07 | 0.00061 | 19.9 |
| pfu_aug1.0_61308.1_34673.t1 | 8 | 5 | zf-C2H2_4 | 132 | 150 | 5.0e-17 | 60.8 | 1.5e-05 | 0.026 | 14.8 |
| pfu_aug1.0_61308.1_34673.t1 | 8 | 4 | zf-C2H2_jaz | 134 | 150 | 2.1e-06 | 27.6 | 0.051 | 84.0 | 3.4 |
| pfu_aug1.0_61308.1_34673.t1 | 9 | 6 | zf-H2C2_2 | 162 | 172 | 2.4e-12 | 46.4 | 0.0074 | 12.0 | 6.3 |
| pfu_aug1.0_61308.1_34673.t1 | 8 | 5 | zf-C2H2_jaz | 162 | 181 | 2.1e-06 | 27.6 | 0.019 | 31.0 | 4.8 |
| pfu_aug1.0_61308.1_34673.t1 | 9 | 6 | zf-C2H2 | 163 | 184 | 1.0e-21 | 75.8 | 6.8e-06 | 0.011 | 16.0 |
| pfu_aug1.0_61308.1_34673.t1 | 8 | 6 | zf-C2H2_4 | 163 | 184 | 5.0e-17 | 60.8 | 0.00067 | 1.1 | 9.7 |
| pfu_aug1.0_61308.1_34673.t1 | 9 | 7 | zf-H2C2_2 | 177 | 202 | 2.4e-12 | 46.4 | 0.00036 | 0.6 | 10.5 |
| pfu_aug1.0_61308.1_34673.t1 | 8 | 6 | zf-C2H2_jaz | 192 | 212 | 2.1e-06 | 27.6 | 3.2e-05 | 0.053 | 13.6 |
| pfu_aug1.0_61308.1_34673.t1 | 9 | 7 | zf-C2H2 | 193 | 215 | 1.0e-21 | 75.8 | 7.7e-05 | 0.13 | 12.6 |
| pfu_aug1.0_61308.1_34673.t1 | 8 | 7 | zf-C2H2_4 | 193 | 215 | 5.0e-17 | 60.8 | 1.5e-05 | 0.024 | 14.9 |
| pfu_aug1.0_61308.1_34673.t1 | 9 | 8 | zf-H2C2_2 | 208 | 232 | 2.4e-12 | 46.4 | 0.0031 | 5.1 | 7.5 |
| pfu_aug1.0_61308.1_34673.t1 | 9 | 8 | zf-C2H2 | 223 | 245 | 1.0e-21 | 75.8 | 1.9e-05 | 0.031 | 14.6 |
| pfu_aug1.0_61308.1_34673.t1 | 8 | 8 | zf-C2H2_4 | 223 | 245 | 5.0e-17 | 60.8 | 9.5e-05 | 0.16 | 12.3 |
| pfu_aug1.0_61308.1_34673.t1 | 8 | 7 | zf-C2H2_jaz | 223 | 245 | 2.1e-06 | 27.6 | 0.00082 | 1.4 | 9.1 |
| pfu_aug1.0_61308.1_34673.t1 | 9 | 9 | zf-H2C2_2 | 238 | 261 | 2.4e-12 | 46.4 | 1.6e-06 | 0.0027 | 17.9 |
| pfu_aug1.0_61308.1_34673.t1 | 9 | 9 | zf-C2H2 | 252 | 267 | 1.0e-21 | 75.8 | 0.0085 | 14.0 | 6.2 |
| pfu_aug1.0_61308.1_34673.t1 | 8 | 8 | zf-C2H2_jaz | 252 | 261 | 2.1e-06 | 27.6 | 0.28 | 460.0 | 1.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_61308.1_34673.t1 | gi|334327375|ref|XP_003340888.1| | 1.0e-21 |
Transcript
| Transcript ID | pfu_aug1.0_61308.1_34673.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_61308.1_34673.t1 catcataagaaggatcatgtatcaaacagatcatttccttgtaaggaatgtgataaagtgtatcatacaaagaccccctg gctacatcatatagcaaatatacattgtaataattttgggaatgaactctttacttgtgagagatgcctggcttcttttc cgtatgttgcctccttgaaaaatcaccagaaacgctgtaatgctggacctgccatagatatcatcacatgtaatttatgt gaagaaacgtttgtacattatgcgttactacagaaccatgtggaactgatgcattctgggattgatgccaaaatcaaatg ccggcactgtgatctttggtttaaatctgaggaggaaatgacaaaacatgcggaagttcatcaaagttcttcataccaat gtcagatctgtaaaaaatgcttctcatcaaacgatgatttaattcaacacgggaactgtattaagaaaatcaagtcttta tctttagaatgcacgttttgtggcagaaatttcgtgaaacttccaatgtacaaaaggcacatgttacttcatgtcaaaac aaacttaaaaaagaagtttgaatgtgaactgtgtcaaaaagagtgtgcgagtgcggagtcttataaacgtcatcagttca gccatttaccggaggcagagaaaccacatcgatgtgaggaatgtggacatggatgtagtacacgagctctactgaagctt cacatgaagaatcatagagaaaacaagaacgattacatgtgtgatacttgtggtgcggcgttcagggtcaataaacagct cattgtaagtaaacatgtacaacctaagctgtcttaa |
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Protein
| Protein ID | pfu_aug1.0_61308.1_34673.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_61308.1_34673.t1 HHKKDHVSNRSFPCKECDKVYHTKTPWLHHIANIHCNNFGNELFTCERCLASFPYVASLKNHQKRCNAGPAIDIITCNLC EETFVHYALLQNHVELMHSGIDAKIKCRHCDLWFKSEEEMTKHAEVHQSSSYQCQICKKCFSSNDDLIQHGNCIKKIKSL SLECTFCGRNFVKLPMYKRHMLLHVKTNLKKKFECELCQKECASAESYKRHQFSHLPEAEKPHRCEECGHGCSTRALLKL HMKNHRENKNDYMCDTCGAAFRVNKQLIVSKHVQPKLS |
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