Gene
| Gene Model ID | pfu_aug1.0_614.1_22228 |
|---|---|
| Locus | scaffold614.1 : 46676 ... 58610 : + |
| To GenomeBrowser | scaffold614.1:46676..58610 |
| Genes list of scaffold | scaffold614.1 |
| Synonym | pfu_aug2.0_1674.1_15187 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_614.1_22228.t1 | 2 | 1 | Ldl_recept_a | 2 | 8 | 4.7e-09 | 35.9 | 0.38 | 5700.0 | -2.7 |
| pfu_aug1.0_614.1_22228.t1 | 2 | 2 | Ldl_recept_a | 38 | 70 | 4.7e-09 | 35.9 | 3.2e-13 | 4.7e-09 | 35.9 |
Transcript
| Transcript ID | pfu_aug1.0_614.1_22228.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_614.1_22228.t1 atgcaaacatttccatgcaataaaaagcatcgaaatggatatgttttatggaccctatttatttcttcatcattcgcatc gtacagaattccatgtaatactgtgagcggaaaggagggatttctatgtgaaaatggggagtgcacgctgaagtattggt tctgtgatggatcagacgattgtactgacggatccgatgaggaattatgcaattcaacaattttggatcaaggtataagc gatgttgtaagtaaacaacttctcgctgctacctgtaaccattgggtgtactaccaatgtggcttcaaatatccgtctga ctttgtacgtgctaaaacatgggatgaagtcaacggatatgtctggacctcggaagatgttgacaacatttgcaggaatg tcaacgtcatagagagacttattcgaagaatcatagatcagaactgtcgcgtcagcatttggacgaacctcattacaaaa ggcttagcgtacagaataaaggaacccataatacggaaatacggagatatggaaggaccattttgcaatatgagagtcat cgtagatgaacacctgtgggacgagtatgttaacccagtattgaaactcacggacgaacaaaggagaaagcttcagaggg gtcaactactataa |
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Protein
| Protein ID | pfu_aug1.0_614.1_22228.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_614.1_22228.t1 MQTFPCNKKHRNGYVLWTLFISSSFASYRIPCNTVSGKEGFLCENGECTLKYWFCDGSDDCTDGSDEELCNSTILDQGIS DVVSKQLLAATCNHWVYYQCGFKYPSDFVRAKTWDEVNGYVWTSEDVDNICRNVNVIERLIRRIIDQNCRVSIWTNLITK GLAYRIKEPIIRKYGDMEGPFCNMRVIVDEHLWDEYVNPVLKLTDEQRRKLQRGQLL |
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