Gene
| Gene Model ID | pfu_aug1.0_614.1_22232 |
|---|---|
| Locus | scaffold614.1 : 94537 ... 96815 : - |
| To GenomeBrowser | scaffold614.1:94537..96815 |
| Genes list of scaffold | scaffold614.1 |
| Synonym | pfu_aug2.0_1674.1_15185 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_614.1_22232.t1 | 1 | 1 | Nucleotid_trans | 105 | 314 | 4.5e-19 | 69.0 | 5.1e-23 | 7.6e-19 | 68.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_614.1_22232.t1 | gi|312071516|ref|XP_003138644.1| | hypothetical protein LOAG_03059 [Loa loa] | 1.0e-19 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_614.1_22232.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_614.1_22232.t1 atgaagtcattgcaccgaatgtcattttccaggacggtgtggcctctttttcattatcacaaatggcgcctcattctctt catagccctgatgattatgtatctgattttattttcgaaaagctcaaattttgaatcgctcaccgagtcagagaaattaa aacttctgtcagcaccggatatgagaaacatttcaaatatagtagttaaaatgtctcgcagtctcgagaatccgttcgtt atgatgacattattgaataaggcgtttttgccgtttgctttaagctggttgtgcaacactaagtatatggacgtacataa gcatgtgttatttcttacgacggacacacagacggatgccatgttacgtcatcactggcctgacgtcacatccgttgtac tgcatggagttgacagcaagagaaatgagtcatacagtcaagtaggatatgttaaattaatggtgaaaagaactatagca attctatctatattggaagcaaacactgccgtttttttgttcgaagtcgactgtttatggaagcgaaatccattgccgtt ccttcaaagtcaaaacctggtcgatatcgtcgcgactaaagtctcaaaggaggaatttgtagtcgctgggggattcttat acttatttccgaccaattccacgaaacaactttggggagccctaacaaagcgtcttctagtattattcgacaaaattcga tttttatctcctgaaacatctgtgtccgaaggtgacaatgaccaacagtatttatcaatacttataaggaaaaattatgt gggaattaggtataaactactttttgacgaggaatttcccgatggaagttggtataatttaacactagcggaaaggtcgg ctatgaatccgtatataattaacaataattggttagtcggaaattatgagaagatagagcgggctcagagatggagacat tggtttataaggaaggattttacttgtgatgaacagaatatagcgttgaattttcagaatttaaacagcgtcgactcgat tttgtaa |
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Protein
| Protein ID | pfu_aug1.0_614.1_22232.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_614.1_22232.t1 MKSLHRMSFSRTVWPLFHYHKWRLILFIALMIMYLILFSKSSNFESLTESEKLKLLSAPDMRNISNIVVKMSRSLENPFV MMTLLNKAFLPFALSWLCNTKYMDVHKHVLFLTTDTQTDAMLRHHWPDVTSVVLHGVDSKRNESYSQVGYVKLMVKRTIA ILSILEANTAVFLFEVDCLWKRNPLPFLQSQNLVDIVATKVSKEEFVVAGGFLYLFPTNSTKQLWGALTKRLLVLFDKIR FLSPETSVSEGDNDQQYLSILIRKNYVGIRYKLLFDEEFPDGSWYNLTLAERSAMNPYIINNNWLVGNYEKIERAQRWRH WFIRKDFTCDEQNIALNFQNLNSVDSIL |
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