Gene
| Gene Model ID | pfu_aug1.0_6140.1_38270 |
|---|---|
| Locus | scaffold6140.1 : 32120 ... 40585 : - |
| To GenomeBrowser | scaffold6140.1:32120..40585 |
| Genes list of scaffold | scaffold6140.1 |
| Synonym | pfu_aug2.0_3521.1_05844 |
Manual annotation
| Study field | other |
|---|---|
| Gene name | hypothetical protein |
| Description | similar (22%) to XP_001198784.1| PREDICTED: similar to leukotriene B4 receptor; BLTR [Strongylocentrotus purpuratus |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6140.1_38270.t1 | 1 | 1 | 7tm_1 | 36 | 483 | 3.8e-31 | 108.1 | 1.3e-34 | 9.3e-31 | 106.8 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_6140.1_38270.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6140.1_38270.t1 atgtctatgtacagtgacgagctccatgaccttaatgacagggcagttaaagcactcattccagccatcatttacgttgt catacttatgatcatcggtctcattggaaatccattagtgatatacttctatggctgtaaacaaaagcctacgccgtctt actatttcatagtgacacttgcaatttttgattcgataacttgctccttgtcgatgccactggagattgttgacttagtg aggttttacacatttgaaagttcggaagcatgcaagttattgagattcataaattattttgcaagcattgcatccggttt tactctcattgccatagcagtcgacagatacagaaaaatctgcagaccattcgaaacccaaatttcattacatctttgta agataatcatcgtctttctcgtaattgcatctttatttttctcctggccggcagccgttttctttaaagttgtggaggtt aatgtaaccgaatcagtgactgtgattggatatgactgcacaacggtgagagacgatgaattcaaaacttacattacggt ttacaatatcattctcttcgttatgttcgcaggtgccataactgtactaattgtattgtattccttggtagcaaggaaga tattcactttaaaaagcttcaagttctacgcccagaaaagacaaagtcatcgacgcaaagcaagaccacaaacgtctact acaaataacacagaagatactgctggctttagctcatacagcgattctcttactactgcaactgagattcaaaccggact gtccgacattggtgaaaacgactttcctctgttaactataccagaaacaagtccgacaccttctgttgcagcaacatttt cgagtcgaaagatagtgccatatgatacagaaaaaagagacatcaattctgctgtaccgataagtaactcaacactcaac ttgcaacgatatgatagttttgacgaatccatactgaaagaaaatatggcatccattgtgaatagatctaactcagcaaa cattgagaagctaaaatcccatcaaatgcaattaaagcaaaacagaaatgcaatgaattcaagattgaagagcgtcaatg aatcagaaactacacaatctactgacgttactccgaacggaaaggaaacattcactcgtcaaagtatcacgagagactct aacggaagagtaaatattgaccaaaagaaacttcaagcgcaaaacataaacacgcgaaaatacactattgtgatgctatc tatttcagtggcgttcattataagtttcttgccatatttgggtctgattacttggagaactctttccaaggattatgaac ccaacttattctcggaatcggaacttgttgcatttcaaatcggactccgatcgtttcttttgagtagcgcttgtaaccct ctcatctatggatttctgaatactgagttccaaagtttcgtgctttcaatcttttgctgttgtaagaaaaagtccaaaga aaaatcttcagaaatttctacttag |
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Protein
| Protein ID | pfu_aug1.0_6140.1_38270.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6140.1_38270.t1 MSMYSDELHDLNDRAVKALIPAIIYVVILMIIGLIGNPLVIYFYGCKQKPTPSYYFIVTLAIFDSITCSLSMPLEIVDLV RFYTFESSEACKLLRFINYFASIASGFTLIAIAVDRYRKICRPFETQISLHLCKIIIVFLVIASLFFSWPAAVFFKVVEV NVTESVTVIGYDCTTVRDDEFKTYITVYNIILFVMFAGAITVLIVLYSLVARKIFTLKSFKFYAQKRQSHRRKARPQTST TNNTEDTAGFSSYSDSLTTATEIQTGLSDIGENDFPLLTIPETSPTPSVAATFSSRKIVPYDTEKRDINSAVPISNSTLN LQRYDSFDESILKENMASIVNRSNSANIEKLKSHQMQLKQNRNAMNSRLKSVNESETTQSTDVTPNGKETFTRQSITRDS NGRVNIDQKKLQAQNINTRKYTIVMLSISVAFIISFLPYLGLITWRTLSKDYEPNLFSESELVAFQIGLRSFLLSSACNP LIYGFLNTEFQSFVLSIFCCCKKKSKEKSSEIST |
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