Gene
| Gene Model ID | pfu_aug1.0_6153.1_45361 |
|---|---|
| Locus | scaffold6153.1 : 696 ... 22590 : + |
| To GenomeBrowser | scaffold6153.1:696..22590 |
| Genes list of scaffold | scaffold6153.1 |
| Synonym | pfu_aug2.0_174.1_13724 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6153.1_45361.t1 | 1 | 1 | GPS | 282 | 322 | 1.3e-13 | 50.8 | 1.1e-16 | 3.4e-13 | 49.4 |
| pfu_aug1.0_6153.1_45361.t1 | 3 | 1 | Ion_trans | 349 | 365 | 4.7e-08 | 32.5 | 0.53 | 1600.0 | -1.9 |
| pfu_aug1.0_6153.1_45361.t1 | 1 | 1 | PLAT | 394 | 501 | 2.1e-14 | 53.8 | 1.7e-17 | 5.2e-14 | 52.5 |
| pfu_aug1.0_6153.1_45361.t1 | 3 | 2 | Ion_trans | 586 | 752 | 4.7e-08 | 32.5 | 0.25 | 760.0 | -0.8 |
| pfu_aug1.0_6153.1_45361.t1 | 2 | 1 | PKD_channel | 830 | 866 | 6.0e-38 | 130.3 | 0.58 | 1700.0 | -3.0 |
| pfu_aug1.0_6153.1_45361.t1 | 3 | 3 | Ion_trans | 889 | 1079 | 4.7e-08 | 32.5 | 1.6e-11 | 4.7e-08 | 32.5 |
| pfu_aug1.0_6153.1_45361.t1 | 2 | 2 | PKD_channel | 891 | 1087 | 6.0e-38 | 130.3 | 1.99993e-41 | 6.0e-38 | 130.3 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_6153.1_45361.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6153.1_45361.t1 atggtcagtggggacagtcttcagagacaggtcatttacggagaattgaccagttatactgtccagctccaggtgggacc ggactatgacgactacaatacgactgtctacgtcagaattacagacgttcacgatgcagcaacagtggtcaaagccgccg atgaacagcctttacttgttaaacctatgagtgctacagccatcgaagcaaaatttacagccatgaccacagagttggct gacaaccttgacgaagagatagccaagggtgacacgataggattgaacgaactggccgctacgttagccagtctcataaa cggggccaaatttggttgcgtagatttgtgtatcacgtcacatggtgcaaaccgcgttgcgagatgcatgcgtgttgcgg taaaggcctcgaatgttaactttgacgatccaagtaacaccgacaaaaaggatgtagaggataaaacattctatgattca gactgggaaacagaccaagaaggtattccatttgatgtaccaagcttggagcaaggaacagacgaattacttcgaatcac taataaagagtatcaaattaatacgggcaaacgaacagagggtatatttgctagcgccctccaatcattacgagggcaat atggtaacactgccgatcatcccgacccgtactcttgctttatggacagtgatgaggtgaatggatacacaggtgaagtt tcattcgccatcagacagatgcaaccaggagagcatgaccgttacatcagcaagtcacatgtccccacaagcttccctaa gggatcaggggagttttctaccaattataccagtcagtttatatccgctggctgtaagtactatgacgaaactgcacaag actgggccacgtcaggatgtaaggttagcccttatacaaatgacaagactgtacgttgtgaatgtactcatctgaccacg tttgccggaggatgggttgttgtacctaacaccatcgactggaacttcgtgttctccaatatggacttctataagaatcc tacactttacattacccagattatcatcattgttgtctatctaatagctgtgatttgggctagacgacaagacaagctgg atgttgaaaagcttggactgacaccacttgcagacaatgacaagaaagatcactattattacgagatagttgttgtcacc ggtatgagaaggaatgcagggtcagattcaaaggtaagcttcatcttagctggcgaaaacgatgagacagaagttagaga actcgtggacaagaaaaggaagattctaaggcgtggagctgtggacggatttctgatggcagtatcaaaaccccttggtc aactgacttacctgcatttatggcacgacaattcgggaaaagggaagtttgcctcttggtacatgcgcagtatagttgtc cgtgacgttcaaacaaatgacaagtacattttcatcgccaacaaatggtttgccgtagaggaagacgatggactgatcga cagaataattccagttgctggaaaagagcagatgacagaattcagccatttattctcagagaagaccacaaagagtttga gtgacggccatctttggttctccgttgtagccagacctccacagagccggttcacacgtgtacaacgtgtgtcgtgttgc ctatgcctcctgttcatgaccatggtcacaaatgccatgttctatgagacagctgaaaacactgatgccaacaacacttt cacgttcggaccatttgcattgacacctgagcagatctacattggagtggtcagcaacctgattgtatttcccatcaact tcttggtagtgctgctattcagaaagtcacgtccaaggaagaagcgaccatcgagagtccttgaagctcttaaagaaaca tccaaacctgctacctctgtaacagacatcaatccaactttgaaagcatcgcaaagctcgtgcccaacacctcaaatatt ggataaaaatagaccggacacatcgatgtcacgagcacaaacctcgttatcgattgttgacgtagcacattccaataaaa acaagaagaagaaacattgggatctgccgtggtggtttgtgataattggttggattttgctctggcttgcgaccttgacc tcggcagcgtttgtgacgttttatggcgtccagttccaggatctcaaatgcaagaaatggatcacttccatgttaatatc attttttgcgtcagtttttataacacagccggttaaggtgttcctgactgcgattttcttctctttgataataaaaaatc ccggaggcgatgacgatgaggaggcagaggatgaagagaatgctcagctgcaacaagacgaagaattattacataacaat gaaggtgaagtgttctcgttcacaaaaccacgtaaggctgcataccgacctcctgacccgagtctgcttcaaaaagcgcg ggaagttcgaatgaaggagatcaaaatgtgggcagtagtacgcgagatcgtcttctatgcatttttcttatggattttaa tggtgatcagctaccgtaacaggagctataactccttcttatacaagcagagcttggataaagtcttcatcgccaccaat gacacaagacatcattacatgaagcttttgagaggtcttatacgggagaagaaggaattcttcagagaattttggaatct agtcgacatcgggatatgcgcaatgtcggtcactgcaatcgtcatttatttctatcgtctgtttgagacgaacagactga cagaacgatttaaaatatcacacggtaatgaatacatgaagttccagtatgtcggttattggagtgaattgttcagttat atcattggttggctcgtattcttcgcttcacttaaatttctgaaattgctacgtttcaacaagaggatgtctcttttggc ctcaacgctaaaaagctccgctaaagatttgatgcacttcagcgtcatctttaacattatatttatggcattcatacagc ttttctatctggtttatgcggcaaacattacctcattcaagacattcgtcagttcctgtgagtctggaatcgtcatgatg atgggcaagtttgatatctacgagatgatagccgtggagcccatcatgacccaaattttcattttcggttacgtcgtcac tattaccttcataacggtcaacatgttcttgtccattctgaatgaaacattctcctccgtccgaagcgatattgccaaac aatgcaatgactacgaaatcgtcgacttcatgatgaaccgcttcaaaatgtggactggacttggcacacctgataccaat gccatgaaaccggatgtagtcaaaggcggagaaaacggagaacgggaagtagaagaatttccggaacgaattgaccgatt gctacattccatctcgtacatgtatatggagaaggacagactggatactctactggagatgaacagtggcaaggcgcgaa tgaaggcaatgggaatggggatgtcacaccctcccccggctgtcagcagaaagtaccaacaaccaccaaataaaatgaca atggtccacactaactattaa |
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Protein
| Protein ID | pfu_aug1.0_6153.1_45361.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6153.1_45361.t1 MVSGDSLQRQVIYGELTSYTVQLQVGPDYDDYNTTVYVRITDVHDAATVVKAADEQPLLVKPMSATAIEAKFTAMTTELA DNLDEEIAKGDTIGLNELAATLASLINGAKFGCVDLCITSHGANRVARCMRVAVKASNVNFDDPSNTDKKDVEDKTFYDS DWETDQEGIPFDVPSLEQGTDELLRITNKEYQINTGKRTEGIFASALQSLRGQYGNTADHPDPYSCFMDSDEVNGYTGEV SFAIRQMQPGEHDRYISKSHVPTSFPKGSGEFSTNYTSQFISAGCKYYDETAQDWATSGCKVSPYTNDKTVRCECTHLTT FAGGWVVVPNTIDWNFVFSNMDFYKNPTLYITQIIIIVVYLIAVIWARRQDKLDVEKLGLTPLADNDKKDHYYYEIVVVT GMRRNAGSDSKVSFILAGENDETEVRELVDKKRKILRRGAVDGFLMAVSKPLGQLTYLHLWHDNSGKGKFASWYMRSIVV RDVQTNDKYIFIANKWFAVEEDDGLIDRIIPVAGKEQMTEFSHLFSEKTTKSLSDGHLWFSVVARPPQSRFTRVQRVSCC LCLLFMTMVTNAMFYETAENTDANNTFTFGPFALTPEQIYIGVVSNLIVFPINFLVVLLFRKSRPRKKRPSRVLEALKET SKPATSVTDINPTLKASQSSCPTPQILDKNRPDTSMSRAQTSLSIVDVAHSNKNKKKKHWDLPWWFVIIGWILLWLATLT SAAFVTFYGVQFQDLKCKKWITSMLISFFASVFITQPVKVFLTAIFFSLIIKNPGGDDDEEAEDEENAQLQQDEELLHNN EGEVFSFTKPRKAAYRPPDPSLLQKAREVRMKEIKMWAVVREIVFYAFFLWILMVISYRNRSYNSFLYKQSLDKVFIATN DTRHHYMKLLRGLIREKKEFFREFWNLVDIGICAMSVTAIVIYFYRLFETNRLTERFKISHGNEYMKFQYVGYWSELFSY IIGWLVFFASLKFLKLLRFNKRMSLLASTLKSSAKDLMHFSVIFNIIFMAFIQLFYLVYAANITSFKTFVSSCESGIVMM MGKFDIYEMIAVEPIMTQIFIFGYVVTITFITVNMFLSILNETFSSVRSDIAKQCNDYEIVDFMMNRFKMWTGLGTPDTN AMKPDVVKGGENGEREVEEFPERIDRLLHSISYMYMEKDRLDTLLEMNSGKARMKAMGMGMSHPPPAVSRKYQQPPNKMT MVHTNY |
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