Gene
| Gene Model ID | pfu_aug1.0_6153.1_45364 |
|---|---|
| Locus | scaffold6153.1 : 34610 ... 61136 : - |
| To GenomeBrowser | scaffold6153.1:34610..61136 |
| Genes list of scaffold | scaffold6153.1 |
| Synonym | pfu_aug2.0_174.1_13726 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6153.1_45364.t1 | 5 | 1 | Laminin_G_3 | 174 | 301 | 4.4e-27 | 95.2 | 6.4e-06 | 0.024 | 14.8 |
| pfu_aug1.0_6153.1_45364.t1 | 5 | 2 | Laminin_G_3 | 422 | 575 | 4.4e-27 | 95.2 | 1.9e-12 | 7.1e-09 | 36.0 |
| pfu_aug1.0_6153.1_45364.t1 | 5 | 3 | Laminin_G_3 | 638 | 774 | 4.4e-27 | 95.2 | 1.9e-09 | 7.1e-06 | 26.3 |
| pfu_aug1.0_6153.1_45364.t1 | 5 | 4 | Laminin_G_3 | 845 | 991 | 4.4e-27 | 95.2 | 9.3e-12 | 3.5e-08 | 33.8 |
| pfu_aug1.0_6153.1_45364.t1 | 5 | 5 | Laminin_G_3 | 1437 | 1466 | 4.4e-27 | 95.2 | 0.84 | 3100.0 | -1.8 |
| pfu_aug1.0_6153.1_45364.t1 | 1 | 1 | REJ | 1869 | 1980 | 1.5e-09 | 36.7 | 8.4e-13 | 3.1e-09 | 35.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6153.1_45364.t1 | gi|291239795|ref|XP_002739813.1| | PREDICTED: polycystic kidney disease protein 1-like 2-like [Saccoglossus kowalevskii] | 2.0e-16 |
Transcript
| Transcript ID | pfu_aug1.0_6153.1_45364.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6153.1_45364.t1 gtaccgacgattgcttgactgatgcagttgtgaatcctgatatgtcttacacttggttgtcattgaataataccgctact tatttcgacgggcaaactatcgcgggatccggtacatgtattggaattagcccaaacggacaactcgttcgaaaatcctg ttcagcgtttacctgcattatatgtgaatactcaacaaagaacgtgatagaaatagacaatatccatgttttggaatcgc ctgcaacaaatgaaatcctgacgaaatattccgaggaaagttttacggagatggtatatacctgggaatttgacgattcg acatcaggatccttattatctttcgatggaaataggtcagataataagcttattactttgacctcttccactgggttatc catagaaaacgacggcatcctcggcagggtaattcaggtagagggatcttttgatggacttgtgtaccgtctggcacatg atgaccactgtctagtagatacggtgaactgtcctagaggtatctctatggaattctatatcaaagacctaaacacatct gactgtgtcatagtagacactaagaatgacggtacaacagggatcgtcatctggttggaatcgagagaacgaaaattgca tgtatctgtaaacgagatgaattaccaatggacatcctggatgtggttgactatggaggaatggatccacgttggtgtca catggcaccgccattttggaatcactatgtacaccaactactggaaagtatacaatacaagagagtaccgtcctgttacc ccagcatctcattcatttcctagcacagaaattattgtcggaaaatgcacaaatgacagcacacatttgagactcgatga tgttattataagagactacatgatggacgaatctgattatgcttcaatacgacagggcaaagagctggaatcctgtgagg aatatagtatagcaggttttcatggaatacagaatgtcaccatcgacaacaatcgtgaagacaatgacactaccacgtca gtagtaacctgtgacttcacctcagaatggactggatatacgttgccttttgacgacttagatgtgaatgctactattcc aaccaatgctacagtatcaatgtataaaggtactctggagtatgtagagggtgttcgtggtaatgctactaggctgaatg gctcaggaatacttatcagtgatatgttgccaaattgcctcgggaatatagagaactgcttttttggactaactataggt ctatggataagagtggaagaaatagactcttcatcaaattctatcaccattttagaaatgggtggcaatttgtatcaaaa tcagagcggagtatcttttatttgtaccaatatctcaaatgaagacttaattcagtgtaaatatacaattgcatacaaat ctgagatgtggaacattaattttaccctcctgtctaatacatggagtcatgtagtgatgacctggaatccctctaaatcc ctgtatgtttatatcaatggacattctctgtcggatttcggagtactggcaagttatcataatgttacatcaaacggtta taatccacaccaccacaattcgactattttcgttggtgcatcatcctttgcaaatgatgaaaagcatacactactggttg atgatggatatttaatcgacagcttcctatcagagtcaaaaatccgaacgctatatgatgtaaaatttccacgaatctac ctaaattcctcaaatactgacaataatcaagatttcataaatgctgaacaattgtcatatactcgaggtgtcacaaagca ctcgcttgtattcaacaacacgatgatctttatggagaaagccgattcttgcattacaaattttgagttttgtcacaatg gattgaaaatagaattctggttgttactggaggatctattgctagatggttcacgacaagtacttctgatttcacagaat tcgagtaccggatatggttttacgttatacatgttcaatgacacaagtggcattcaactaggaatagaatatatcttaga atcaaattacacgattgcatctattccaataacgagtcaagcatggacgcatttgtcagtttcattttcgaacataacaa acttggatgtctacttgaatggaatccaaacaaactttaaatcaataacgtttaatagtaccatcaatgatacgagggta cttggagagaaagtccagatatctactggctccaacaacttcaattcagagaatgtgaacatgaagatggataatatgac aatagacgaagtccttgtaactgatcttgtacaactccattctgatgtctacaataacgccccggtttttcatttacctt ttgacaactggagactcctaagtcctggattccagagtgaaggttggattggtttagctgctagtctgaatgtaacacat ccaggtcctatcagctttacaggacagtttgcttacgattgcttaggatccccagactactgtatagaaggatttgcttt cagtgtatggatgaaaccggcctcgtcgcttccttctgacagtgttgtattatcagctatgaccagtaacagaggctttg cactagtgtactatacatctttccagtctatatcaaaccaatattggatcattgtaaggaataatgccatagaggtcagt cttccacttgagatagtgagtaatgtttggtcgtttgtttcattttcctggtacatcaacggtaccgtgcatggcatggt gaatggtgaccctgtaccctattctgaagcaattgcttcttccattacttcttcggtcgtacaacctgttgtgaacctag agttcagtcctcctgttgatccataccttgctacattgaccaactttgaaggcgaaatcgatgagtttattttctacaga cgacctcttccatctgatgttttgctcgatctatacaaaaatataacattcacaaaacgtccatcatattggtcctttga tgccttaccgaatatattcaatggaagctcggataacatgactattcaaaatggcagcataggaaatgcaacaaaagtaa tttctggaatggaatggttgaatatcacaggagagctgaatggaacaaactgtttattggacattgatagctgcgtccac ggattcacgcttcatctgaatttaagatttataacagaagaggattctgatcaatttattttaacgacaggagcccatga ttcatcgagcttgggaatcgccttaatgttcatatccatgaacaagagtttaccgttcaggcgatatttcgaagcagctg ttcttacaaccacacatgagtacagaacatatccagatattggattcgacagagggatctttgaaatagatgagatgcat tttctagatagagcaacatttgagaacacactagatgagggcgagatgtggcatcattggcctcggaaaatccacatgag tcaaaatgatgtcagggcaaacgaagtgactctggacgaatgcttcaacttatgcgaggaaacagagttttgtcagcatt tctctttttgcgataatttccgatttagaaactgtctatacggcaacatctctacaaatacgacgagcacatttgcagag gattgtgatatgtttgtgcaagtatatataggaattgtagctcaaggtgctggatgtgttgattctgcacaattttcaag cttcgtcgatcatggagtgaaatcttcttctgtagaatgtcaatctcagtgcaaaaatgcttcatttgtctacgcgatat tttctggaagtttcatatgttattgcgcagggaggaatgagacgagtatcgtgtatgaatttccaggaaaatacactctt acaatatatgctctaaatgagataagttccatggtatacacaacagacatatttgtgtctacttcgatcgaatctgtaat catttctgtaccatctcgtatcgcaacattccagaattttcagtcaaatgttactgtaattggaggtatgtttattactt gtaatatttcctttggtgatggagtatccgacagtattttcattgaaaatgcgacacaaccattcctgttcaaccatacc tacgtcgacgagggactccagcaagtgaatgtaacatgttacaatggggtatcggaagcatccaattttacatttattac aaccttgcatccaattattaacttcacaattcaaggttcgcctttcgttcagtatggaaacgatatttcagtgacatatt tttctgatcttggcagaaacgtcacagccgaaatgtatgtggacgggaacttattcaatatgtctcatatagaaggggca atgagaaatgaatcactaattgtaccatttctcacatatcagacgatcgggattcacacaataaatatttctgtgagcaa tgaagtgactccaccattgtttgagcttctgacagtgacggtcgacaaaaagattacgttaaattcaaattcaacctgtc tcggaaataactacttcccagcgaatggaatggctaacataacaataggtttcttaaccggatcaaatgtgaacatatca gcggactttgtagtctccgaagaagagtactattaccctggagatatcagtgaacaggacgttttgataacattttctat atcaattccaggaaattatggtattggtttggtgctcgaaaattcggtgtctgcaatggtagtgttgcatgatatttatg tcgatatttctttggaaaatttgacattctttgtacaagaaccagtaccagggttgtctatagatcccgttcaattcatc attacccttccaagcaattacccatcaccttataactcatacgtccaacttgattatggggacggcaattctgagacgac tgatcttacttttacaaatggaaccttcgtatcaacatataattacacagtccttagtaattataatatcacaattacaa ctttcaacaacctcagtagttttacttggaattactatctagaactcgttaagcctgtgaagaacttaaccgtattgcct aatagtatggccctcaacgtcggtgatattctcaatcttaagattaatgtgtcaaatggttattatgttacatactatat tgtgatatctgaagatcctgtagtccgatataattcacctgtgcctgtgtctactccttttgcggcattcgagtacaatc atatattcagaacactaggagaatatgacattgaagtagtagccaacaattctgtcagttctgaaagcattaatttcaca gtttccattgtggaaccgtctgtgaccgttctcgtcggagatactatcgggcaagttggagattccctaacctttcattt ggtcatcgtcgactatggttcaaaaccatgttttctttttgattttggtgatggctttaagattttgtatggtagcagct tttgttcctctcagtcacaatttgcaggcattccattctttttgcacgaaactacaaataccatatcaacaactcacaag tacaacgggtctggtgtggcctttaagacaaagttcgtgtttacgtgtgacgggtggctagatgaaggagacagaatgaa acaagatttcgctgctgacattgtgcgacgtgaacttcttaagtacacattatactacaagatcattcaggagaacgaga cactcgtaccgtttttgcagttgtatggcactgagctaaccactactgaagttctgctacctccaggattcaagaccttc aatatgactgtggacgttgtggtaaagattgaggatcggtacaggggctacacattcttcaaattatctctgacagtgtt tgaggatgtggtacgaaatctagatgagttctctagttatattcaagatccattgcaattagagcaagctgcttcactgt tgaataaaattggtgaatctgatgcaggggatatgtcaaaggatgtgcaggtgtttgaggatgtggtacgaaatctagat gagttttctagttatattcaggatccattgcaattagagcaagctgcttcattgttgaataaaattggtgaatccgatgc aggagatatgtcaaaggatgtgcaggattcaatttctggagtattcgttgatttagtatcatctaccgagaatgaattct ttagtaaaatgacatcagaagagcgtcaaagagctgctaaagcaaccactgcacggaatttcacgaaaccttacaggaag caagaactcaaggtcttctaccaagtttgtgtttttcgtgccaatcggtctacaaatatggccaacgagggctctgattg gaccattttatcggacaacctctacaccaccgatgagaccgtacgccaagtaaaatcccgagcagtgtcaatttcctttg tcgtcaaaggaggagggacaataaaagtcgaggatctagcaactccggtggaaatcaatttccaagtttctcacctatca aatttacctacctcacccatagacttgtcatctaaggctccaaacttcaaaacggtcgtagtgactcggcgtaacggcac gttcgccggcgtccttactacgacctcattacgtatcagcaagttcttactacgttccccgcgtccttactacggtcacg ccacgtttcgtacaacttttgcggtcgtagtgcgaacgccatgtcagaacgtcaatgagtggggttcaacgaagtcatcg aagtggctgacatctttctttctgtctttcatcgagtctgtcctttttatacaacctttgaaggtaatagttgttgccat attctttgccattttgttcaaaactattgatgaagatgagaatgaaatcatcgaaaccttcaaagcagagaccagacatg gcgtcagggtcccgtacactgtaagtcccataagtgatcaagttgtgttcgaggctcgtgaacaccgaaagaaaatgaac aagctgttcgaggttctaagagagatcatgatatatctcatatacttgatcgtagtagctgttctcgcctatgaaaacat ggacctgaattccttcaggacttttacgacgatcacaaatcgttttgtcttcccagcgacaatcaaggagaaaaacttta tcaatgactcttacctttaa |
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Protein
| Protein ID | pfu_aug1.0_6153.1_45364.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6153.1_45364.t1 TDDCLTDAVVNPDMSYTWLSLNNTATYFDGQTIAGSGTCIGISPNGQLVRKSCSAFTCIICEYSTKNVIEIDNIHVLESP ATNEILTKYSEESFTEMVYTWEFDDSTSGSLLSFDGNRSDNKLITLTSSTGLSIENDGILGRVIQVEGSFDGLVYRLAHD DHCLVDTVNCPRGISMEFYIKDLNTSDCVIVDTKNDGTTGIVIWLESRERKLHVSVNEMNYQWTSWMWLTMEEWIHVGVT WHRHFGITMYTNYWKVYNTREYRPVTPASHSFPSTEIIVGKCTNDSTHLRLDDVIIRDYMMDESDYASIRQGKELESCEE YSIAGFHGIQNVTIDNNREDNDTTTSVVTCDFTSEWTGYTLPFDDLDVNATIPTNATVSMYKGTLEYVEGVRGNATRLNG SGILISDMLPNCLGNIENCFFGLTIGLWIRVEEIDSSSNSITILEMGGNLYQNQSGVSFICTNISNEDLIQCKYTIAYKS EMWNINFTLLSNTWSHVVMTWNPSKSLYVYINGHSLSDFGVLASYHNVTSNGYNPHHHNSTIFVGASSFANDEKHTLLVD DGYLIDSFLSESKIRTLYDVKFPRIYLNSSNTDNNQDFINAEQLSYTRGVTKHSLVFNNTMIFMEKADSCITNFEFCHNG LKIEFWLLLEDLLLDGSRQVLLISQNSSTGYGFTLYMFNDTSGIQLGIEYILESNYTIASIPITSQAWTHLSVSFSNITN LDVYLNGIQTNFKSITFNSTINDTRVLGEKVQISTGSNNFNSENVNMKMDNMTIDEVLVTDLVQLHSDVYNNAPVFHLPF DNWRLLSPGFQSEGWIGLAASLNVTHPGPISFTGQFAYDCLGSPDYCIEGFAFSVWMKPASSLPSDSVVLSAMTSNRGFA LVYYTSFQSISNQYWIIVRNNAIEVSLPLEIVSNVWSFVSFSWYINGTVHGMVNGDPVPYSEAIASSITSSVVQPVVNLE FSPPVDPYLATLTNFEGEIDEFIFYRRPLPSDVLLDLYKNITFTKRPSYWSFDALPNIFNGSSDNMTIQNGSIGNATKVI SGMEWLNITGELNGTNCLLDIDSCVHGFTLHLNLRFITEEDSDQFILTTGAHDSSSLGIALMFISMNKSLPFRRYFEAAV LTTTHEYRTYPDIGFDRGIFEIDEMHFLDRATFENTLDEGEMWHHWPRKIHMSQNDVRANEVTLDECFNLCEETEFCQHF SFCDNFRFRNCLYGNISTNTTSTFAEDCDMFVQVYIGIVAQGAGCVDSAQFSSFVDHGVKSSSVECQSQCKNASFVYAIF SGSFICYCAGRNETSIVYEFPGKYTLTIYALNEISSMVYTTDIFVSTSIESVIISVPSRIATFQNFQSNVTVIGGMFITC NISFGDGVSDSIFIENATQPFLFNHTYVDEGLQQVNVTCYNGVSEASNFTFITTLHPIINFTIQGSPFVQYGNDISVTYF SDLGRNVTAEMYVDGNLFNMSHIEGAMRNESLIVPFLTYQTIGIHTINISVSNEVTPPLFELLTVTVDKKITLNSNSTCL GNNYFPANGMANITIGFLTGSNVNISADFVVSEEEYYYPGDISEQDVLITFSISIPGNYGIGLVLENSVSAMVVLHDIYV DISLENLTFFVQEPVPGLSIDPVQFIITLPSNYPSPYNSYVQLDYGDGNSETTDLTFTNGTFVSTYNYTVLSNYNITITT FNNLSSFTWNYYLELVKPVKNLTVLPNSMALNVGDILNLKINVSNGYYVTYYIVISEDPVVRYNSPVPVSTPFAAFEYNH IFRTLGEYDIEVVANNSVSSESINFTVSIVEPSVTVLVGDTIGQVGDSLTFHLVIVDYGSKPCFLFDFGDGFKILYGSSF CSSQSQFAGIPFFLHETTNTISTTHKYNGSGVAFKTKFVFTCDGWLDEGDRMKQDFAADIVRRELLKYTLYYKIIQENET LVPFLQLYGTELTTTEVLLPPGFKTFNMTVDVVVKIEDRYRGYTFFKLSLTVFEDVVRNLDEFSSYIQDPLQLEQAASLL NKIGESDAGDMSKDVQVFEDVVRNLDEFSSYIQDPLQLEQAASLLNKIGESDAGDMSKDVQDSISGVFVDLVSSTENEFF SKMTSEERQRAAKATTARNFTKPYRKQELKVFYQVCVFRANRSTNMANEGSDWTILSDNLYTTDETVRQVKSRAVSISFV VKGGGTIKVEDLATPVEINFQVSHLSNLPTSPIDLSSKAPNFKTVVVTRRNGTFAGVLTTTSLRISKFLLRSPRPYYGHA TFRTTFAVVVRTPCQNVNEWGSTKSSKWLTSFFLSFIESVLFIQPLKVIVVAIFFAILFKTIDEDENEIIETFKAETRHG VRVPYTVSPISDQVVFEAREHRKKMNKLFEVLREIMIYLIYLIVVAVLAYENMDLNSFRTFTTITNRFVFPATIKEKNFI NDSYL |
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