Gene
| Gene Model ID | pfu_aug1.0_6154.1_16859 |
|---|---|
| Locus | scaffold6154.1 : 1996 ... 19155 : + |
| To GenomeBrowser | scaffold6154.1:1996..19155 |
| Genes list of scaffold | scaffold6154.1 |
| Synonym | NA |
Manual annotation
| Study field | Reproduction |
|---|---|
| Gene name | C1q domain containing protein |
| Description | Best hit to MgC1q83. 98 bits, 8e-19 |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6154.1_16859.t1 | 1 | 1 | C1q | 70 | 192 | 7.5e-21 | 74.4 | 2.6e-24 | 9.6e-21 | 74.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6154.1_16859.t1 | gi|325504465|emb|CBX41732.1| | putative C1q domain containing protein MgC1q83 [Mytilus galloprovincialis] | 7.0e-19 |
Transcript
| Transcript ID | pfu_aug1.0_6154.1_16859.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6154.1_16859.t1 atgatgctaacgaatttggagaagtttgacatttgtaacacttgatatcgttgcccagacagtgaaaacggatgcgaaaa cttatcatctcggactgttatagatgctgttaaagctctttataaagaagtcaaggatcttcaggggaaattggcgaacc tagagaaaaatattacagatatttcaatcaacgattcacagcaaattgcatttacagcgtgccgaacaactggagttcaa cttagcaacggtcaaactgtagcctacgaccatgtggttaccaatcttggaggtggttatgacactaatcagtttcaatt ctctgcatcgttatcagggctgtatcaattcacggtgacggttatgtctgggatgaataccataatacatcttcgtatcg tcaagaacggatcagagctggtaaaggttttcagtacaggacattgggacgaaacgggaacaaatgtcgtaaacgtgcac ctacataaaaatgacagggtgtgggttcaggcaatggatacgagtagctcattggaaggtggttttgggtacaactgttt ctctggaaatctcattcaagcagatgtataa |
|
Protein
| Protein ID | pfu_aug1.0_6154.1_16859.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6154.1_16859.t1 MMLTNLEKFDICNTXYRCPDSENGCENLSSRTVIDAVKALYKEVKDLQGKLANLEKNITDISINDSQQIAFTACRTTGVQ LSNGQTVAYDHVVTNLGGGYDTNQFQFSASLSGLYQFTVTVMSGMNTIIHLRIVKNGSELVKVFSTGHWDETGTNVVNVH LHKNDRVWVQAMDTSSSLEGGFGYNCFSGNLIQADV |
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