Gene
Gene Model ID | pfu_aug1.0_6154.1_16859 |
---|---|
Locus | scaffold6154.1 : 1996 ... 19155 : + |
To GenomeBrowser | scaffold6154.1:1996..19155 |
Genes list of scaffold | scaffold6154.1 |
Synonym | NA |
Manual annotation
Study field | Reproduction |
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Gene name | C1q domain containing protein |
Description | Best hit to MgC1q83. 98 bits, 8e-19 |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_6154.1_16859.t1 | 1 | 1 | C1q | 70 | 192 | 7.5e-21 | 74.4 | 2.6e-24 | 9.6e-21 | 74.1 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_6154.1_16859.t1 | gi|325504465|emb|CBX41732.1| | putative C1q domain containing protein MgC1q83 [Mytilus galloprovincialis] | 7.0e-19 |
Transcript
Transcript ID | pfu_aug1.0_6154.1_16859.t1 |
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Definition | - |
>pfu_aug1.0_6154.1_16859.t1 atgatgctaacgaatttggagaagtttgacatttgtaacacttgatatcgttgcccagacagtgaaaacggatgcgaaaa cttatcatctcggactgttatagatgctgttaaagctctttataaagaagtcaaggatcttcaggggaaattggcgaacc tagagaaaaatattacagatatttcaatcaacgattcacagcaaattgcatttacagcgtgccgaacaactggagttcaa cttagcaacggtcaaactgtagcctacgaccatgtggttaccaatcttggaggtggttatgacactaatcagtttcaatt ctctgcatcgttatcagggctgtatcaattcacggtgacggttatgtctgggatgaataccataatacatcttcgtatcg tcaagaacggatcagagctggtaaaggttttcagtacaggacattgggacgaaacgggaacaaatgtcgtaaacgtgcac ctacataaaaatgacagggtgtgggttcaggcaatggatacgagtagctcattggaaggtggttttgggtacaactgttt ctctggaaatctcattcaagcagatgtataa |
Protein
Protein ID | pfu_aug1.0_6154.1_16859.t1 |
---|---|
Definition | - |
>pfu_aug1.0_6154.1_16859.t1 MMLTNLEKFDICNTXYRCPDSENGCENLSSRTVIDAVKALYKEVKDLQGKLANLEKNITDISINDSQQIAFTACRTTGVQ LSNGQTVAYDHVVTNLGGGYDTNQFQFSASLSGLYQFTVTVMSGMNTIIHLRIVKNGSELVKVFSTGHWDETGTNVVNVH LHKNDRVWVQAMDTSSSLEGGFGYNCFSGNLIQADV |