Gene
| Gene Model ID | pfu_aug1.0_6180.1_38275 |
|---|---|
| Locus | scaffold6180.1 : 305 ... 15615 : - |
| To GenomeBrowser | scaffold6180.1:305..15615 |
| Genes list of scaffold | scaffold6180.1 |
| Synonym | pfu_aug2.0_79.1_30159 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6180.1_38275.t1 | 4 | 1 | Hexapep | 47 | 81 | 5.7e-10 | 38.2 | 5.5e-08 | 0.00027 | 20.2 |
| pfu_aug1.0_6180.1_38275.t1 | 4 | 2 | Hexapep | 82 | 90 | 5.7e-10 | 38.2 | 0.0079 | 39.0 | 3.9 |
| pfu_aug1.0_6180.1_38275.t1 | 4 | 3 | Hexapep | 112 | 129 | 5.7e-10 | 38.2 | 3.6e-05 | 0.18 | 11.4 |
| pfu_aug1.0_6180.1_38275.t1 | 4 | 4 | Hexapep | 132 | 159 | 5.7e-10 | 38.2 | 0.0013 | 6.3 | 6.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6180.1_38275.t1 | gi|115670790|ref|XP_784928.2| | 9.0e-35 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_6180.1_38275.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6180.1_38275.t1 atgatttatcttttgaatttgatagtcaaggtcacggatgcaataagtcgtgatatactgagtagatggagttacccaat cgtacctgataatagttttatagaagaacggagctctgtgacgtatggtagacataatgtatacctcagtaacgatgtca ctttagccaggggttgtgaactagagaagagtgtctatgtgggaagagggactattgtcggcagtaatactgttataact aactcagtcatcggcaaggattgtaggatagaagatgaactgatgaacagagatgcaagtcaaatttatgccgccggaga aaatgtgaaaatagatggagcttatatatgggacaatgtgacaatagagaataattgttgtgtagaatcgtctatattgt gtaatggagtggtgctgtatgattcatcacatgtatcacagggatgtatactctcatgggatgtaaaagttggtcccagt ataacgatcccccgtggtacaaggctgaaatcatcacctgatgatgaagaggatgattttggagaggatttacccgaagc agaccaagccacaaaggaaaacgcccaccattttggatctcggagtcaggcttacttgttccgtcttactcaggatccga cagacagtgatgaggaagaggaggatcagctcatacatgacatgtttggactcgagatccagtctgagtccgagtcagac actgagacagacttagacgagtctagtgaagataacatcatgggagatgacatggatgctcctctgataaaatggctaca ggaagctgaagaggagtcatctgaagaggatagtgactag |
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Protein
| Protein ID | pfu_aug1.0_6180.1_38275.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6180.1_38275.t1 MIYLLNLIVKVTDAISRDILSRWSYPIVPDNSFIEERSSVTYGRHNVYLSNDVTLARGCELEKSVYVGRGTIVGSNTVIT NSVIGKDCRIEDELMNRDASQIYAAGENVKIDGAYIWDNVTIENNCCVESSILCNGVVLYDSSHVSQGCILSWDVKVGPS ITIPRGTRLKSSPDDEEDDFGEDLPEADQATKENAHHFGSRSQAYLFRLTQDPTDSDEEEEDQLIHDMFGLEIQSESESD TETDLDESSEDNIMGDDMDAPLIKWLQEAEEESSEEDSD |
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