Gene
| Gene Model ID | pfu_aug1.0_6187.1_45383 |
|---|---|
| Locus | scaffold6187.1 : 39186 ... 43155 : + |
| To GenomeBrowser | scaffold6187.1:39186..43155 |
| Genes list of scaffold | scaffold6187.1 |
| Synonym | pfu_aug2.0_21.1_03437 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6187.1_45383.t1 | 2 | 1 | Glyco_hydro_38 | 120 | 448 | 0.0 | 254.8 | 0.0 | 0.0 | 254.8 |
| pfu_aug1.0_6187.1_45383.t1 | 1 | 1 | Alpha-mann_mid | 453 | 538 | 1.1e-18 | 67.1 | 5.9e-22 | 2.9e-18 | 65.8 |
| pfu_aug1.0_6187.1_45383.t1 | 1 | 1 | Glyco_hydro_38C | 596 | 1081 | 4.4e-33 | 114.7 | 2.2e-36 | 1.1e-32 | 113.4 |
| pfu_aug1.0_6187.1_45383.t1 | 2 | 2 | Glyco_hydro_38 | 789 | 878 | 0.0 | 254.8 | 0.12 | 600.0 | -0.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6187.1_45383.t1 | gi|224089166|ref|XP_002188716.1| | PREDICTED: alpha-mannosidase 2 [Taeniopygia guttata] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_6187.1_45383.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6187.1_45383.t1 atgaagtacaaacagaggctcctcttcgcagccgttgctctcccactctcattcctcgctctgttcgcttacttccattt caatcgaaatgtcaagcgggcacgtaagcaagaccaagccttcttctatttccaaaacccaatgaaagcaattgaaaatg tcgttaagatggtacagagcccgattgcaacctgtgacctaaaacctgctctcaccgctgattggttagtagacgaaata tatgacgagatgaacttcactacaaatcccagagacacaggtgggctgtatgtcctgcacgacaaggaaacaatatacga ctctcctccctacaggaaaaccgggaaggaaaagataaccgtcattgtggtcccccactctcataatgaccctggttggc tatggacgctggatacttactacacagtcagaacgaggcatatcctcaccaataccgttaattttctaagtaagcatcca gatttcaaaatgatttggaccgaaatggtgttccttgatatatggtggcaagagagtagcgaaccgttaaagtccaagtt taaagagctcgtcttgaaaggacagctagagattttgtctggaggctgggtgtcggtagatgaagctactacacattact cagccgtactcgatcaacttgtagaaggacatatgtggctgcaagaaactctgggagtctatccaaacatcagctggtct atagatcctttcggatactccacaagtcttccttatctttggagaaaaagtggaatgaaggacatggctattttacgttt acatggagcactgaaacaatatatgggcagacgacatttaatgacttttaactggcgacagtcttgggattcaaagggca aaaatgacattttgtgtcacgtagagccgtatactctatatgccatagagtacatctgcggtcctgaccaggaattctgc aaaactctggatttcggtcgacaggcggcattgccggctgaaccttgggcgagatttcccattggtcatggaaagtatgc ggacggattaaagcaatatgtggataagctggtagaacaatacagactaaaggctgataactacaaacacaatgttctgc tgatgccgcatggtgatgacttccgttatatcatggactacgaatttcagagtaattatgacaacatgaagcgtttgatg gattttataaataaaagaagtaacctatacaacatgacaatgagatttgggactgtcggagagtactttgatttattgca cgagagtataagtaaatcaaaagagaaagaagagtcggtgacgggagattttttcacgtacacggatcgcgatgacgagt actggagtggctattacacaactagaccattcgacaagcgcatgattcgttatttccacgaattactgaaggcgacagag atctatctgaccttcgctcaggttcgagctaagcaaagtcgttatgagttcccaaatttacaaaaatctttgaccgactt acagtctgctagacgcactcatggactggtacaacaccatgacgctataacgggaacatcggcagccagtaccgtgaagg attttgaaaaccgaatttctgctgccatagaggcattaaagggcgtgttaacccgaagcgttgatagtattttactgaaa gataaagctaagagttctgtagatctgtcatctatagatgtacagaaacaaccagatcagccggtggagaggcgtgtaat ccctgttaaagtggacggcactcagatggtgttcaccaactctcactcccagcccaggacagaaataatctccctcattg ttaacagcgctgacgtcatggtgctggaccaggatgaaaaagaggtacaagttcaggttaacccatgttggtcaaactat aaccaagctgtggaaggtatgtacgaaatcttcttccctgtccatcttcccgcgatgagtgtagcggtgtatgtactgaa gaaagacgatgaatcgaagaatatacactttggcaatatacatgtttataatggcgacgtagccactgttggaaaaagat tcgagaaagaagtgaaaggcaatcgtgtgaaggaattcagattcgatagtggtgaactgagcgtgtttttctccggcgag actgggttattaaaagaaatatgtagagggagtggagagaagaaatgttccgccatagatctagattggattttctataa aggggataacaataacgcttactgtatgggtaaggatgccacacctaatctcatcttcaacagtaggagctttgtgaagg tggtgacagggaagttggtcactcaagttaccgtcaaccataggctactacagcataccgtaacgctgtataataccgac ggtattcagggaagctttgtttacatagaaaatgtggcaacccttactcatgaagacgacaagaacaaagagttattgat gagattatcaacgtctgtcaaaaatgacaacatgcaatattacacggacgaaaattcattccagtacgtcagtcgagtta ccagaaagaattatccaatggctgcgaactatttcccaataacgtctcatgctttcattcaggattccgaaactcgtctg aacgtgcattctgcccagccagtgggtgtcggcagtttcaaaacgggctctcttgagttcttgatagaccgtgtgcccac tttctacgggaaaggattagacgaggcagtgaccgacaataaaccaaccctcagtaaattcataatacaccttgaagctt tcgatctgaactcgagaatgccaccagtggacgatccaagaaaccgccttgatttttcatcatgggaaggctacatagta aacgatcttctgaacaatcccataatcccattgtatacgtcacgaactgacttatatcctatcgccgtggaaacccttct tcagaatccggtgccttgtgaattaagtgtcgcgaattttagacatttcattacaaacaatcagcaatttcttggtactg ggttaacattccataaaagatttgtgaactgtcattttaagaacaatgcttgtcctaaagaactgcctttggacattcat aacctttttaaagacttgaaattgaagaaagttaggaaaatgtcccttactcatctccatgaagaacgagagcttgatag atcagaaccaattgatataaaacctatggaattagaatcgttttatttgacttgggaccggtag |
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Protein
| Protein ID | pfu_aug1.0_6187.1_45383.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6187.1_45383.t1 MKYKQRLLFAAVALPLSFLALFAYFHFNRNVKRARKQDQAFFYFQNPMKAIENVVKMVQSPIATCDLKPALTADWLVDEI YDEMNFTTNPRDTGGLYVLHDKETIYDSPPYRKTGKEKITVIVVPHSHNDPGWLWTLDTYYTVRTRHILTNTVNFLSKHP DFKMIWTEMVFLDIWWQESSEPLKSKFKELVLKGQLEILSGGWVSVDEATTHYSAVLDQLVEGHMWLQETLGVYPNISWS IDPFGYSTSLPYLWRKSGMKDMAILRLHGALKQYMGRRHLMTFNWRQSWDSKGKNDILCHVEPYTLYAIEYICGPDQEFC KTLDFGRQAALPAEPWARFPIGHGKYADGLKQYVDKLVEQYRLKADNYKHNVLLMPHGDDFRYIMDYEFQSNYDNMKRLM DFINKRSNLYNMTMRFGTVGEYFDLLHESISKSKEKEESVTGDFFTYTDRDDEYWSGYYTTRPFDKRMIRYFHELLKATE IYLTFAQVRAKQSRYEFPNLQKSLTDLQSARRTHGLVQHHDAITGTSAASTVKDFENRISAAIEALKGVLTRSVDSILLK DKAKSSVDLSSIDVQKQPDQPVERRVIPVKVDGTQMVFTNSHSQPRTEIISLIVNSADVMVLDQDEKEVQVQVNPCWSNY NQAVEGMYEIFFPVHLPAMSVAVYVLKKDDESKNIHFGNIHVYNGDVATVGKRFEKEVKGNRVKEFRFDSGELSVFFSGE TGLLKEICRGSGEKKCSAIDLDWIFYKGDNNNAYCMGKDATPNLIFNSRSFVKVVTGKLVTQVTVNHRLLQHTVTLYNTD GIQGSFVYIENVATLTHEDDKNKELLMRLSTSVKNDNMQYYTDENSFQYVSRVTRKNYPMAANYFPITSHAFIQDSETRL NVHSAQPVGVGSFKTGSLEFLIDRVPTFYGKGLDEAVTDNKPTLSKFIIHLEAFDLNSRMPPVDDPRNRLDFSSWEGYIV NDLLNNPIIPLYTSRTDLYPIAVETLLQNPVPCELSVANFRHFITNNQQFLGTGLTFHKRFVNCHFKNNACPKELPLDIH NLFKDLKLKKVRKMSLTHLHEERELDRSEPIDIKPMELESFYLTWDR |
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