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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_6189.1_38276
Locus scaffold6189.1 : 1 ... 3795 : -
To GenomeBrowser scaffold6189.1:1..3795
Genes list of scaffold scaffold6189.1
Synonym pfu_aug2.0_127.1_23511

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_6189.1_38276.t1 2 1 MFS_1 2 189 4.4e-21 74.9 3.6e-20 2.6e-16 59.2
pfu_aug1.0_6189.1_38276.t1 2 2 MFS_1 351 423 4.4e-21 74.9 2.5e-08 0.00019 20.2

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_6189.1_38276.t1 gi|242012171|ref|XP_002426810.1| monocarboxylate transporter, putative [Pediculus humanus corporis] 5.0e-30

Transcript
Transcript IDpfu_aug1.0_6189.1_38276.t1
Definition-
>pfu_aug1.0_6189.1_38276.t1
atgttgacgatgtgtttgaattgtggtgtggtgaggacgtttggtgtgttgtttgtggagtttcgggaaaggtaccacgc
agaaaccacccagatcaccctggtagtggctgtacaaaacgtagtgtacggagtcacaataacattggccctcacagttg
gcttacagttcctgacatcccgtcagtgtgttataattggaggaatattgtgttcactttcattcatcttgtctggtcgc
accagcaatatttacttcctgatgttctcttatgggatcctttatggtatcagtatggcattgaccgtagctgcagtggt
gttgatacttggtcggtacttcgacaaacatcggggtctagtaaatgggtgttctcaagccgcctcaagcttcggtacct
tgatactagcaccaacaatacgtttcttgatagacgaattcggcttcagtggtgggcttttacttgtgagcgctatctta
gcacattgtatcatggcagctgcgttcatgcgacctccagaactttataaaagttggagaaagctaaaagagaaggctgc
caaacgcaaagctgcggctagagtacctctactggagaatgaaaacgaacgtaagtccgtttctagaggtactagtgatt
caacttattccccattggcacgaaaagcgatgttgcatagaatgagatcaaggtcagacgaggccgaggacgtctatccg
agaaaagaatctgaatctgaaaagccatctgaagatgcaaacgtggaaacaaagacagaaacaataaccgaggaagaggc
acattcatcgtcgaacttgttccgaaatagaaagagagaatttatgtactgtagtcatgagcttatcctagcaatgtcac
aagaagaactgtcgaagacgaagaagaagaagcgcccctctagtgtcagtagtcacgatagtaaacaaagtgaaagtgtt
cttagtagtaaccaagaaaacaaggaattagggaaacactgtctcaaatctgtgttcaatttaaccgttctcaaaaatat
agagttcctgttgtttgtttttgcattcttttttggttgctcgggatcattcttaccgacagtatacattccggatgttg
ctaatgataatcatatcagtaaaagaaattccgccatgttggtctccgttaccatggcttttgacgtcattggccggtgc
actatgggtattttatcggaccgaaaattcgtggaaaggaaaactctgattataatttctatgataattac

Protein
Protein IDpfu_aug1.0_6189.1_38276.t1
Definition-
>pfu_aug1.0_6189.1_38276.t1
MLTMCLNCGVVRTFGVLFVEFRERYHAETTQITLVVAVQNVVYGVTITLALTVGLQFLTSRQCVIIGGILCSLSFILSGR
TSNIYFLMFSYGILYGISMALTVAAVVLILGRYFDKHRGLVNGCSQAASSFGTLILAPTIRFLIDEFGFSGGLLLVSAIL
AHCIMAAAFMRPPELYKSWRKLKEKAAKRKAAARVPLLENENERKSVSRGTSDSTYSPLARKAMLHRMRSRSDEAEDVYP
RKESESEKPSEDANVETKTETITEEEAHSSSNLFRNRKREFMYCSHELILAMSQEELSKTKKKKRPSSVSSHDSKQSESV
LSSNQENKELGKHCLKSVFNLTVLKNIEFLLFVFAFFFGCSGSFLPTVYIPDVANDNHISKRNSAMLVSVTMAFDVIGRC
TMGILSDRKFVERKTLIIISMII

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