Gene
| Gene Model ID | pfu_aug1.0_6191.1_52726 |
|---|---|
| Locus | scaffold6191.1 : 16452 ... 21975 : - |
| To GenomeBrowser | scaffold6191.1:16452..21975 |
| Genes list of scaffold | scaffold6191.1 |
| Synonym | pfu_aug2.0_504.1_14236 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6191.1_52726.t1 | 2 | 1 | F-actin_cap_A | 4 | 106 | 1.19951e-42 | 145.8 | 7.6e-27 | 2.8e-23 | 82.3 |
| pfu_aug1.0_6191.1_52726.t1 | 2 | 2 | F-actin_cap_A | 105 | 148 | 1.19951e-42 | 145.8 | 3.6e-21 | 1.3e-17 | 63.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6191.1_52726.t1 | gi|66508517|ref|XP_624862.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_6191.1_52726.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6191.1_52726.t1 atgaacgacaattcaaaaaggtacgaccatttacggaaagaagcctcagaattcagacctcatgattgtgacagcactgc tgaatcgtggagatcggcgatagaaacggaattgtccaactatagaagtcagcacttcagtaacggccatgtagcagtat acggcactagttcaggaggaaacattaccattatagcttgtttagaaagtcatcagttccaaccaaaaaacttctggaat ggacgatggaggtcacaatggtcgatgacctttcccacatctggaggcagggtggaagtagcaggcctctttaaagtcca gaaagccatctctgaaaattaccagaccatgtcggatacaacgtttaaagccttacgtcggcagctgcctgtaactcgta ccaagatagactggaacaaaattatcggttacaaaattggtagtgcactcaaaaaccaatga |
|
Protein
| Protein ID | pfu_aug1.0_6191.1_52726.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6191.1_52726.t1 MNDNSKRYDHLRKEASEFRPHDCDSTAESWRSAIETELSNYRSQHFSNGHVAVYGTSSGGNITIIACLESHQFQPKNFWN GRWRSQWSMTFPTSGGRVEVAGLFKVQKAISENYQTMSDTTFKALRRQLPVTRTKIDWNKIIGYKIGSALKNQ |
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