Gene
| Gene Model ID | pfu_aug1.0_6194.1_59963 |
|---|---|
| Locus | scaffold6194.1 : 3643 ... 46435 : - |
| To GenomeBrowser | scaffold6194.1:3643..46435 |
| Genes list of scaffold | scaffold6194.1 |
| Synonym | pfu_aug2.0_1523.1_11716 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6194.1_59963.t1 | 16 | 1 | ADIP | 48 | 89 | 3.6e-07 | 30.2 | 0.77 | 820.0 | -0.2 |
| pfu_aug1.0_6194.1_59963.t1 | 11 | 1 | IncA | 58 | 159 | 2.1e-12 | 47.0 | 0.013 | 13.0 | 5.2 |
| pfu_aug1.0_6194.1_59963.t1 | 8 | 1 | Tropomyosin | 64 | 167 | 3.7e-08 | 32.7 | 0.012 | 13.0 | 4.7 |
| pfu_aug1.0_6194.1_59963.t1 | 7 | 1 | AAA_13 | 67 | 239 | 1.4e-09 | 37.0 | 0.00093 | 0.98 | 7.7 |
| pfu_aug1.0_6194.1_59963.t1 | 16 | 2 | ADIP | 106 | 178 | 3.6e-07 | 30.2 | 0.0015 | 1.6 | 8.6 |
| pfu_aug1.0_6194.1_59963.t1 | 11 | 2 | IncA | 113 | 226 | 2.1e-12 | 47.0 | 9.4e-05 | 0.099 | 12.2 |
| pfu_aug1.0_6194.1_59963.t1 | 16 | 3 | ADIP | 157 | 240 | 3.6e-07 | 30.2 | 0.00043 | 0.45 | 10.3 |
| pfu_aug1.0_6194.1_59963.t1 | 8 | 2 | Tropomyosin | 180 | 238 | 3.7e-08 | 32.7 | 1.2e-05 | 0.012 | 14.6 |
| pfu_aug1.0_6194.1_59963.t1 | 16 | 4 | ADIP | 251 | 330 | 3.6e-07 | 30.2 | 0.045 | 48.0 | 3.8 |
| pfu_aug1.0_6194.1_59963.t1 | 8 | 3 | Tropomyosin | 257 | 459 | 3.7e-08 | 32.7 | 0.13 | 140.0 | 1.3 |
| pfu_aug1.0_6194.1_59963.t1 | 11 | 3 | IncA | 267 | 360 | 2.1e-12 | 47.0 | 0.003 | 3.2 | 7.3 |
| pfu_aug1.0_6194.1_59963.t1 | 7 | 2 | AAA_13 | 276 | 460 | 1.4e-09 | 37.0 | 6.0e-06 | 0.0063 | 15.0 |
| pfu_aug1.0_6194.1_59963.t1 | 16 | 5 | ADIP | 308 | 385 | 3.6e-07 | 30.2 | 0.0035 | 3.7 | 7.4 |
| pfu_aug1.0_6194.1_59963.t1 | 8 | 4 | Tropomyosin | 358 | 559 | 3.7e-08 | 32.7 | 0.18 | 190.0 | 0.9 |
| pfu_aug1.0_6194.1_59963.t1 | 16 | 6 | ADIP | 386 | 468 | 3.6e-07 | 30.2 | 7.8e-05 | 0.083 | 12.7 |
| pfu_aug1.0_6194.1_59963.t1 | 11 | 4 | IncA | 397 | 520 | 2.1e-12 | 47.0 | 0.0057 | 6.1 | 6.4 |
| pfu_aug1.0_6194.1_59963.t1 | 16 | 7 | ADIP | 467 | 539 | 3.6e-07 | 30.2 | 0.0003 | 0.31 | 10.9 |
| pfu_aug1.0_6194.1_59963.t1 | 8 | 5 | Tropomyosin | 469 | 632 | 3.7e-08 | 32.7 | 0.045 | 47.0 | 2.9 |
| pfu_aug1.0_6194.1_59963.t1 | 7 | 3 | AAA_13 | 473 | 646 | 1.4e-09 | 37.0 | 1.8e-08 | 1.9e-05 | 23.3 |
| pfu_aug1.0_6194.1_59963.t1 | 11 | 5 | IncA | 523 | 631 | 2.1e-12 | 47.0 | 0.00065 | 0.69 | 9.4 |
| pfu_aug1.0_6194.1_59963.t1 | 16 | 8 | ADIP | 534 | 610 | 3.6e-07 | 30.2 | 0.0003 | 0.32 | 10.8 |
| pfu_aug1.0_6194.1_59963.t1 | 11 | 6 | IncA | 596 | 689 | 2.1e-12 | 47.0 | 0.032 | 33.0 | 3.9 |
| pfu_aug1.0_6194.1_59963.t1 | 16 | 9 | ADIP | 629 | 711 | 3.6e-07 | 30.2 | 0.0006 | 0.63 | 9.9 |
| pfu_aug1.0_6194.1_59963.t1 | 8 | 6 | Tropomyosin | 644 | 703 | 3.7e-08 | 32.7 | 0.022 | 23.0 | 3.9 |
| pfu_aug1.0_6194.1_59963.t1 | 7 | 4 | AAA_13 | 665 | 839 | 1.4e-09 | 37.0 | 0.0038 | 4.1 | 5.7 |
| pfu_aug1.0_6194.1_59963.t1 | 11 | 7 | IncA | 685 | 792 | 2.1e-12 | 47.0 | 1.8e-06 | 0.0019 | 17.8 |
| pfu_aug1.0_6194.1_59963.t1 | 16 | 10 | ADIP | 694 | 772 | 3.6e-07 | 30.2 | 0.47 | 500.0 | 0.5 |
| pfu_aug1.0_6194.1_59963.t1 | 8 | 7 | Tropomyosin | 713 | 934 | 3.7e-08 | 32.7 | 3.4e-11 | 3.7e-08 | 32.7 |
| pfu_aug1.0_6194.1_59963.t1 | 7 | 5 | AAA_13 | 773 | 950 | 1.4e-09 | 37.0 | 3.0e-05 | 0.031 | 12.7 |
| pfu_aug1.0_6194.1_59963.t1 | 11 | 8 | IncA | 826 | 942 | 2.1e-12 | 47.0 | 0.0072 | 7.6 | 6.0 |
| pfu_aug1.0_6194.1_59963.t1 | 16 | 11 | ADIP | 826 | 890 | 3.6e-07 | 30.2 | 0.56 | 590.0 | 0.2 |
| pfu_aug1.0_6194.1_59963.t1 | 16 | 12 | ADIP | 884 | 955 | 3.6e-07 | 30.2 | 0.00066 | 0.7 | 9.7 |
| pfu_aug1.0_6194.1_59963.t1 | 11 | 9 | IncA | 914 | 1022 | 2.1e-12 | 47.0 | 0.071 | 76.0 | 2.8 |
| pfu_aug1.0_6194.1_59963.t1 | 16 | 13 | ADIP | 985 | 1087 | 3.6e-07 | 30.2 | 0.0038 | 4.0 | 7.3 |
| pfu_aug1.0_6194.1_59963.t1 | 7 | 6 | AAA_13 | 988 | 1176 | 1.4e-09 | 37.0 | 0.056 | 59.0 | 1.9 |
| pfu_aug1.0_6194.1_59963.t1 | 8 | 8 | Tropomyosin | 988 | 1200 | 3.7e-08 | 32.7 | 0.089 | 95.0 | 1.9 |
| pfu_aug1.0_6194.1_59963.t1 | 11 | 10 | IncA | 994 | 1111 | 2.1e-12 | 47.0 | 0.011 | 12.0 | 5.4 |
| pfu_aug1.0_6194.1_59963.t1 | 16 | 14 | ADIP | 1049 | 1119 | 3.6e-07 | 30.2 | 0.12 | 130.0 | 2.4 |
| pfu_aug1.0_6194.1_59963.t1 | 16 | 15 | ADIP | 1118 | 1199 | 3.6e-07 | 30.2 | 0.00023 | 0.24 | 11.2 |
| pfu_aug1.0_6194.1_59963.t1 | 11 | 11 | IncA | 1123 | 1230 | 2.1e-12 | 47.0 | 1.4e-05 | 0.015 | 14.9 |
| pfu_aug1.0_6194.1_59963.t1 | 7 | 7 | AAA_13 | 1162 | 1219 | 1.4e-09 | 37.0 | 0.24 | 260.0 | -0.2 |
| pfu_aug1.0_6194.1_59963.t1 | 16 | 16 | ADIP | 1201 | 1254 | 3.6e-07 | 30.2 | 0.54 | 580.0 | 0.3 |
Transcript
| Transcript ID | pfu_aug1.0_6194.1_59963.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6194.1_59963.t1 atggctaaagccagggacttagaaagagagttacgttcactgacagtggagaaaactcgtgctgagacaatgctagaggt tgacaatgtaagatttcgagaattgacgacagaacaagtgttcggatctgccagggaattccagaccagtaaaatgagca gtccagagggagatcagttacgtgatctccagtctcagctcagaagacgtgacgacaccatcgatcaacttaaccgagag ttatctacccttagatcaaagaaatcttctgaggaattatcgaagcgtactaagtccccagatagatcaggatcctctga caaagaattcacgatcatgcagctaaaaacagatctacgtagagcggaacaaagagtggaggacctacaattagaggttt cgaatcgtgagaggaaagtaaataatttacagacacagttaaacgacttacagaaccagttggtcagacgggagtcagaa aatacgactcatcaacagaccatcaaaatgatgcaggagaaacatcgtcactcagccggagagagtgccaaactagaaga cgtgatcagacagctgaggaatgacctggatcattataaggaaaaattctcacacgcctctcacgatgtgactcattatg aaaggagaatacgtacattggagacggaacttcaagaatctaaagaacagagaagaaaggctctcgaagaagtaagtaac agtgcttttaaatttgagattggaattttacaagagagagtacgtgagagtcacatgtctacaaaggaccaccatgaagt gttgaagtctgagctcacaagacgagatgagacgattcagaaactgagacgagatgttctacatctccaggagaaacgag atgctgccgtcagtgagctggacgctcagagccgtaacgtagctcaggctcaggatgagaaaaaacgggcggaagatgag tatcatcgtatggagaccaaatctaagacgatggaagacgaggtatcatcgctacggcaacaattagaagacgctaaaaa cgacatccagaagttgacgaacagtttacagaagttacagatgtcctccaaggacacccgggattccttgactgccgagg ttgctgacagacacgacaacattgtaaagctccgaggaagcaaccaagaactggaggaaaagttacgagaggctctgagc tctgcacaacacagaggggatgtcatcaagcagctacgagacgagattaaacaatatcaaactagaattcaggaatatca gaggaaaatggacagcatggagcaggagataaaccagtccaacagtcgttatacggcacaggctcgcgaggttgatcgtc tacagacagtgattcaggagagagatctgacgtccagtcaacacgagacgctgtttaaatctgaaatagccgacagggat gaagagagtcacaggcttaaagctgaaatatctgtccttcacgaaaaactggcacaaaatgctaaccagctggatactaa gagaggtattattactaaccttgaacacaatcttgacgagtccaagaagagatccgctcaccaattggatgatataaata gattagaggaccaagtcagagagctaaatatagaagtgacgtcactacagtctcaggttgagaaacttcaacacacaaat cacacgaaagatgaattggttcagaggttaaaaggtgacttagaaggtgtgcagaaacagcaaaaagacactgttagtaa ggtcataatacgagatgacaccatacaaaagctaaacaatgagatcggtaaactaaaggccaagcactctgagagatcaa gtgaggccagtaaattgtcggagacagtcaaacgactacaagaggcgctaacacaggggcacgtagacatggataaagtc aggacacacagtgaaacagagttacttaaagcggaggatgacatacaatgtcttaagaatgagaactcccagctgaacca gaacgtccaatcatcgacccaggaaatctgtcagctacaagaacaggttcaccagatagaactggaacttaccatctccc aggaaaaacaccgcacttgtcagaaagaggttgccaatagagaccagtgtattcttaaactacaaacggagctggacaca acacaggaaaaataccagggctgtatggaggagctgaatatccgtgaagatgaggtggtaaggttaaacaacaaggtcaa acagcttcaacaggaaataagggatcttaactcacagatagagaacgacaacacaaagattgctgaggatgataaaacga tacagcggcttcagcatgatcaggagatatcgttacaggagctaaaacgtatcatttcgttacagtctctcacccatgat cagagagccaagatgttggagaatcagctgttaacgtaccaaggtgaacacggacactcagatgctgagttcctggagaa agaggacaagatagctcatttagagttagaactagaggaagctcgcagtgaactgggcagcaagggcagacaactctcgg actaccaagatcagattaatgaccttaaagttgagctggcttcagtcagagaacagaaaaacagtgctatgaaggagatt gatcgtctagagcagagtatccagcagttacagctgaatctggcggcatctcaccagcgccacaagtctgacaccacgcg gctccaagaccagatgggacagctagaggcggggctccaccaatcacaggccagggggacggcactcgagcaggagctga caaggagagaggaacagcttaaacagaaggaagctgatatatcggcttgtcgtaacgatatagctgtaaagacagaggag aaacgctatggcgtggcccaggacgccagtctgaactttgggatggaaatgacgcttagagaatatgaaaattctttatt tcagattgagaagtacgaggcgaacgtgaaggatttgaaactggaaattaatcatctacaggccacaaagaatagagctg agacgcagctcgctcatcatgaggagaagttaatgttaatggagcagagcttacagacgacccaggaccagctcagtcag cgcgttacagaggtcgtacgtcacgagcaggtaaatcgtaagctgcaggcagaactcaagacgctccgagagcgaaacac cagctacgaggaggagatcacagagcagaagtcgataatcgacaaactgcggaaagatttgatgtcagctaaggaggagt accactcggcttgtcaggagggaatggcgtataaacaacaggctcacaagacggaggtggagttacagggagccagagaa caggaacaaatgttatctgaacagctccataatttcgagttgaagtatcaggaccttcaacaggagtgtatgaacacgca ggataaaaatagacaaagtctacaggagctctctgctagggaggaagaaatagtggtgctaaaagtagaactctccaacc tccaggagaaatataaatccttattagatgagggagaaaggctcaggaatgaactagacttattacgacataactaccac agtgctaatgatgagatccagggacttcgagtcgcgctcgaggagtcacggtccaatggagacaggcttcatcgggaaag tgaactggtcgtacagaacgtcaatacatgggtccaggagcagaagcttgccaatgagaaacttggaaataaaattagga aagcaattcatcaagataacattttgtattgctgcacaaatgacttttcctggtctaattcttcttga |
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Protein
| Protein ID | pfu_aug1.0_6194.1_59963.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6194.1_59963.t1 MAKARDLERELRSLTVEKTRAETMLEVDNVRFRELTTEQVFGSAREFQTSKMSSPEGDQLRDLQSQLRRRDDTIDQLNRE LSTLRSKKSSEELSKRTKSPDRSGSSDKEFTIMQLKTDLRRAEQRVEDLQLEVSNRERKVNNLQTQLNDLQNQLVRRESE NTTHQQTIKMMQEKHRHSAGESAKLEDVIRQLRNDLDHYKEKFSHASHDVTHYERRIRTLETELQESKEQRRKALEEVSN SAFKFEIGILQERVRESHMSTKDHHEVLKSELTRRDETIQKLRRDVLHLQEKRDAAVSELDAQSRNVAQAQDEKKRAEDE YHRMETKSKTMEDEVSSLRQQLEDAKNDIQKLTNSLQKLQMSSKDTRDSLTAEVADRHDNIVKLRGSNQELEEKLREALS SAQHRGDVIKQLRDEIKQYQTRIQEYQRKMDSMEQEINQSNSRYTAQAREVDRLQTVIQERDLTSSQHETLFKSEIADRD EESHRLKAEISVLHEKLAQNANQLDTKRGIITNLEHNLDESKKRSAHQLDDINRLEDQVRELNIEVTSLQSQVEKLQHTN HTKDELVQRLKGDLEGVQKQQKDTVSKVIIRDDTIQKLNNEIGKLKAKHSERSSEASKLSETVKRLQEALTQGHVDMDKV RTHSETELLKAEDDIQCLKNENSQLNQNVQSSTQEICQLQEQVHQIELELTISQEKHRTCQKEVANRDQCILKLQTELDT TQEKYQGCMEELNIREDEVVRLNNKVKQLQQEIRDLNSQIENDNTKIAEDDKTIQRLQHDQEISLQELKRIISLQSLTHD QRAKMLENQLLTYQGEHGHSDAEFLEKEDKIAHLELELEEARSELGSKGRQLSDYQDQINDLKVELASVREQKNSAMKEI DRLEQSIQQLQLNLAASHQRHKSDTTRLQDQMGQLEAGLHQSQARGTALEQELTRREEQLKQKEADISACRNDIAVKTEE KRYGVAQDASLNFGMEMTLREYENSLFQIEKYEANVKDLKLEINHLQATKNRAETQLAHHEEKLMLMEQSLQTTQDQLSQ RVTEVVRHEQVNRKLQAELKTLRERNTSYEEEITEQKSIIDKLRKDLMSAKEEYHSACQEGMAYKQQAHKTEVELQGARE QEQMLSEQLHNFELKYQDLQQECMNTQDKNRQSLQELSAREEEIVVLKVELSNLQEKYKSLLDEGERLRNELDLLRHNYH SANDEIQGLRVALEESRSNGDRLHRESELVVQNVNTWVQEQKLANEKLGNKIRKAIHQDNILYCCTNDFSWSNSS |
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