Gene
| Gene Model ID | pfu_aug1.0_62.1_14759 |
|---|---|
| Locus | scaffold62.1 : 163074 ... 196385 : - |
| To GenomeBrowser | scaffold62.1:163074..196385 |
| Genes list of scaffold | scaffold62.1 |
| Synonym | pfu_aug2.0_3158.1_29043 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_62.1_14759.t1 | 1 | 1 | PDZ | 197 | 275 | 6.3e-13 | 48.7 | 4.1e-16 | 2.0e-12 | 47.0 |
| pfu_aug1.0_62.1_14759.t1 | 1 | 1 | SAM_1 | 921 | 983 | 2.6e-09 | 37.1 | 1.2e-12 | 6.2e-09 | 35.9 |
| pfu_aug1.0_62.1_14759.t1 | 1 | 1 | SAM_2 | 922 | 983 | 5.5e-13 | 48.5 | 2.5e-16 | 1.3e-12 | 47.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_62.1_14759.t1 | gi|242013065|ref|XP_002427237.1| | conserved hypothetical protein [Pediculus humanus corporis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 2 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_62.1_14759.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_62.1_14759.t1 atgggaaaggggccccgatatcgatcattaatatcattttggttggacattgttaaagttagaaaacatccaataaattt gtctaacctcgacttgatggacttcaagtcctgccaatttagggtaaaacgtttccagtatatagaaaaaataaaggagg gacccctctatattcgtacatgcattgaaaggatgaagtatggatctcgaagtggtgtttacattgagcagaggtctcaa gaaaagggatcaggggaaattccaccaagagaggcgggagatggtcatgaacaccctgacgtcattttgagtgatggtca tgacagaccagatctgaccaatggatttcaagctttcatagagatagatggattacccagcagtgacgagtccgactcgg aggacgtagatatcgactacagaaaaccttctaggatcactttcagtaaagcaccaattagggtatttcccacattttca acggaagagtacgaccggcggaatgaagatgtagatcctgtggcggcatcagcggaatatgaactggaaaaacgtgtgga gaagatggacgtattcccggtcgacctgattaaaggtgcggaaggtcttggtctcagtatcattggtatgggagtcgggg ccgatgctgggcttgaaaaactcgggattttcatcaagacgttaacggcaggtggtgcagctcaacaggatggcaggatt caagtgaatgaccagataatagaagtagatggtaaaagtttggttggtgtcacacaagcatacgcagcctctgtactcag gaataccagtggtcaggtcaagtttatgattggtcgagagaaggaccccagtaaaagtgaggttgcccgtctgatccagc agtccttggaacaagacaggaaacgagaggttctcaggaaacaggagcaagaaagattacaggagcttcacgatagactg aagccccgggacgaagtgctcgagcacgagcatcttgaacacctcaggaaaatgtccgagagcgagacggggagggaact agatgacacagatgacgaagatgaagatgatgatgatgaaatagatgatgataaggacatagacgaatcagagatgatgg aagatacagatcacactgatcatgtgatgacaaatggacaggaagttgatcatgctgccatggatacgatggaaacggca gcaggggagagcacccctattgaacttccgtcagaaatggacagtaatgataacagtttagattcaccagaagagaagcc tgcgatagaggtatttgatttaaaggagagcagtagtgaatcagtgtcacccgacatggaatcacaagccttgtttgtca aacttaaagaggcccagtataaaaatgccgtcacagaggcagagttagcaaaagtgaaggggaggattattttgttagaa agttccgaaaatcagaggaaagattatgaaaagaaatgtgaacagatggcgcaaaggttacgtgacgtggagaaaaagtt agaaagtaaccgtaaagaaatgaatcattaccaggacctgctggaggggtcccagggacagtatatagcactcgagaaaa aaatgaaaaacgacttcgtagctttggagaaaaaatatcataaagcgaaaaaactgataaaggaatatcaacaaagggag aaggactttatacaagagagggagagtctgatgcagcaacaggcagagaaggaccagcagtacgactccctggttaaatc actcaaagataggatcttccgtttggagcgtgaccttggggaagcacaaagagcagcaggattgccagtgctgattccaa gtgaagggtcaaggtcagaggatactgttgtcaagacaaccatatcacctgtgaaatcagcaaataaagaagtgaagccc attcagccaacattgttagataatctgtccttatcatcaagttctgatgggtcaccgccagagggagctgtcagtgcagg agagaagttggatgatgatgctatgtcagacagcttcagagatgtcattcctgccactcagctgttagatactacagcca atcgggacaaaggtcaactggggacgtcaggggtcaacgcaagtaggcgacctccaactaaacggaacaagtctcaggac agtgaaaatgatgtagctgaagaagccaaagttgacggagagagtggcctggaaacatggataaaacatgataggcagga cagtgaatcagaggaatcagcctccacagtgtcccagacgtcttacgacccctcacaaccgtgcttcaaaaatatggagt cggaaatccccgactctgtttccatagaaaccatggatactttggacagtggcagctcaaccagtgtaacctcagggtca aagcctagcaaagggataggattgtccaaacttcttaaatttggaaaaagcagttcaagcaattcaggcggtattgtgct attatcaaataaatctctcgacaaaggcacagcgccccctagtggggatggagggataactcttttgtcaaagcgacctc tcgatgtcacaagctctgcagattcgctggacggtgttagtttggcgagtgatgtgtcgtcatcgtacatggtacaggaa tatgatgatgaagacggcaagaaaactatgtttacgttcaatatatcagggacccctgctatggaggagaaatctcccag taagcgtgtgatgaaccagatacagtcagcatcgatatctgattggacgatagacaacgtctgccattggttgatgggtc tagaactcgacaaatatattcctctctttgaagataaaaatatcacaggatcggcactactgcagctagatgggaccaaa ttacggacaatgggtgtagcaaatagtaaagacagagaattgatgaaaaagaaaattaaggacattaaacagacaatgga aaaagagaagaaaatgcaggaaaaagagaaaaaggcaaaagaaaaagaacaaaagaagcaagcgaaaaagaaatga |
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Protein
| Protein ID | pfu_aug1.0_62.1_14759.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_62.1_14759.t1 MGKGPRYRSLISFWLDIVKVRKHPINLSNLDLMDFKSCQFRVKRFQYIEKIKEGPLYIRTCIERMKYGSRSGVYIEQRSQ EKGSGEIPPREAGDGHEHPDVILSDGHDRPDLTNGFQAFIEIDGLPSSDESDSEDVDIDYRKPSRITFSKAPIRVFPTFS TEEYDRRNEDVDPVAASAEYELEKRVEKMDVFPVDLIKGAEGLGLSIIGMGVGADAGLEKLGIFIKTLTAGGAAQQDGRI QVNDQIIEVDGKSLVGVTQAYAASVLRNTSGQVKFMIGREKDPSKSEVARLIQQSLEQDRKREVLRKQEQERLQELHDRL KPRDEVLEHEHLEHLRKMSESETGRELDDTDDEDEDDDDEIDDDKDIDESEMMEDTDHTDHVMTNGQEVDHAAMDTMETA AGESTPIELPSEMDSNDNSLDSPEEKPAIEVFDLKESSSESVSPDMESQALFVKLKEAQYKNAVTEAELAKVKGRIILLE SSENQRKDYEKKCEQMAQRLRDVEKKLESNRKEMNHYQDLLEGSQGQYIALEKKMKNDFVALEKKYHKAKKLIKEYQQRE KDFIQERESLMQQQAEKDQQYDSLVKSLKDRIFRLERDLGEAQRAAGLPVLIPSEGSRSEDTVVKTTISPVKSANKEVKP IQPTLLDNLSLSSSSDGSPPEGAVSAGEKLDDDAMSDSFRDVIPATQLLDTTANRDKGQLGTSGVNASRRPPTKRNKSQD SENDVAEEAKVDGESGLETWIKHDRQDSESEESASTVSQTSYDPSQPCFKNMESEIPDSVSIETMDTLDSGSSTSVTSGS KPSKGIGLSKLLKFGKSSSSNSGGIVLLSNKSLDKGTAPPSGDGGITLLSKRPLDVTSSADSLDGVSLASDVSSSYMVQE YDDEDGKKTMFTFNISGTPAMEEKSPSKRVMNQIQSASISDWTIDNVCHWLMGLELDKYIPLFEDKNITGSALLQLDGTK LRTMGVANSKDRELMKKKIKDIKQTMEKEKKMQEKEKKAKEKEQKKQAKKK |
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