Gene
| Gene Model ID | pfu_aug1.0_6202.1_38281 |
|---|---|
| Locus | scaffold6202.1 : 16406 ... 22521 : + |
| To GenomeBrowser | scaffold6202.1:16406..22521 |
| Genes list of scaffold | scaffold6202.1 |
| Synonym | pfu_aug2.0_408.1_27361 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6202.1_38281.t1 | 1 | 1 | adh_short | 17 | 172 | 2.4e-31 | 108.8 | 1.2e-34 | 3.0e-31 | 108.5 |
| pfu_aug1.0_6202.1_38281.t1 | 1 | 1 | adh_short_C2 | 17 | 173 | 4.4e-20 | 72.4 | 2.2e-23 | 5.3e-20 | 72.2 |
| pfu_aug1.0_6202.1_38281.t1 | 1 | 1 | KR | 20 | 171 | 4.3e-12 | 46.0 | 2.2e-15 | 5.4e-12 | 45.7 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_6202.1_38281.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6202.1_38281.t1 atgagcgcaaagaaaaagaatttaaagaacaaaattgatggtcaaagtgccagttctggtataggtcaaggaacagctat actattctgtaaacttggagccgaggttgctatcactggtagaaatgaggagaatctccggaaaacagcagcagaatgtg aaaatcaaaatggaaaaaaggccttggccattacagctgaccttgcaaaggaggatgacactcagaaagtgatggagaaa acaatagagcatttcaagaaactagacatattggtgaactctgcaggaatcgtggagacaggtaccatagaaaccacatc actgcagcaatacgatcatgtgatgaatatcaatgtaagatctatgtaccatctaaccatgttagcagttcctcatctgg taaagactaaaggcagcatagttaatgtatccagtgtcaatggcatgagatcatttccaggagttttggcctactgtatg tcaaagagtgctgtggaccagttcacaagatgtattgctcttggtaaaaattctttactttttttccctcttatttaa |
|
Protein
| Protein ID | pfu_aug1.0_6202.1_38281.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6202.1_38281.t1 MSAKKKNLKNKIDGQSASSGIGQGTAILFCKLGAEVAITGRNEENLRKTAAECENQNGKKALAITADLAKEDDTQKVMEK TIEHFKKLDILVNSAGIVETGTIETTSLQQYDHVMNINVRSMYHLTMLAVPHLVKTKGSIVNVSSVNGMRSFPGVLAYCM SKSAVDQFTRCIALGKNSLLFFPLI |
|