Gene
| Gene Model ID | pfu_aug1.0_622.1_36612 |
|---|---|
| Locus | scaffold622.1 : 40606 ... 59221 : + |
| To GenomeBrowser | scaffold622.1:40606..59221 |
| Genes list of scaffold | scaffold622.1 |
| Synonym | pfu_aug2.0_48.1_26748 |
Manual annotation
| Study field | other developmental genes |
|---|---|
| Gene name | fgf8/17/18-like |
| Description | NCBI BLASTP hit to ref|NP_001164697.1| [Saccoglossus kowalevskii] |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_622.1_36612.t1 | 2 | 1 | FGF | 67 | 186 | 2.6e-20 | 72.4 | 1.7e-24 | 2.6e-20 | 72.4 |
| pfu_aug1.0_622.1_36612.t1 | 2 | 2 | FGF | 239 | 243 | 2.6e-20 | 72.4 | 1.0 | 15000.0 | -5.4 |
Transcript
| Transcript ID | pfu_aug1.0_622.1_36612.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_622.1_36612.t1 atgtgctgcttcgtgcacatatttaaacatccaagttgtgttataatatatataggtgctctttcgaaacatacctctgt agaagcgttgtcgacgctgctgctcatagttctggtgaattcagtggacgctaaggatttcacgccgaagttttttgata atagtagtttgaagtaccccaccggagaaagccttacacgtagatacatgttgtggaaccggtgttcccagcgattcgtg cgcatcaagtcgccgaggaagatagacgccagaggaagaaataaatcccgattcgctgaagtagccattacgtcagtagg gccggacgtagtgaccattcaaggggtgaaatctaccctgtacctctgcttcaacaagaagggcagacttcgaggcaagg cctcacctagaaaacatagatgtcacttttcccaaaatctgactgcagatggatatgtgaattttcatcttaaaagtgca actgaccctaagttgttcattggatttagaaacaatgggaaatcattacctgggtataaaaagataacaaataccaggat ggaaaggtgttttgacttaagtttacgtgaattaaatcctaagaaagtggaaggacctttcgacttcaatactttacctc tctcatatgacccagaagaacaagagacattctcaacgaaaaggagaatgcgtaaaatacgtcactaccggaagcggagg cggcatagaaatagaaggaaaagacggaggcagcagagaacaatagataggtga |
|
Protein
| Protein ID | pfu_aug1.0_622.1_36612.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_622.1_36612.t1 MCCFVHIFKHPSCVIIYIGALSKHTSVEALSTLLLIVLVNSVDAKDFTPKFFDNSSLKYPTGESLTRRYMLWNRCSQRFV RIKSPRKIDARGRNKSRFAEVAITSVGPDVVTIQGVKSTLYLCFNKKGRLRGKASPRKHRCHFSQNLTADGYVNFHLKSA TDPKLFIGFRNNGKSLPGYKKITNTRMERCFDLSLRELNPKKVEGPFDFNTLPLSYDPEEQETFSTKRRMRKIRHYRKRR RHRNRRKRRRQQRTIDR |
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