Gene
| Gene Model ID | pfu_aug1.0_6246.1_52730 |
|---|---|
| Locus | scaffold6246.1 : 2740 ... 16565 : - |
| To GenomeBrowser | scaffold6246.1:2740..16565 |
| Genes list of scaffold | scaffold6246.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6246.1_52730.t1 | 1 | 1 | Lactamase_B | 20 | 130 | 2.3e-06 | 27.3 | 5.0e-10 | 3.7e-06 | 26.7 |
| pfu_aug1.0_6246.1_52730.t1 | 1 | 1 | Beta-Casp | 224 | 280 | 8.1e-07 | 29.0 | 3.4e-10 | 2.5e-06 | 27.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6246.1_52730.t1 | gi|115762659|ref|XP_780045.2| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_6246.1_52730.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6246.1_52730.t1 atgacatctatcgtcaagttacaagcgttctcgggaacctacgacgagagtcccccttgttacctattacaggtagacga attccgattcctactggactgtgggtgggacgaagacttcaacatggcttttatcaaagaaatgaaaaggcacattcatc agatagacgctgtcctaataagttatccagaccacgcccatctcggagctttgccatatttggttgggagggcggggcta aattgtccgatctacgcaactgtgcctgtgtataagatgggtcagatgtttatgtatgacttgtatcagtctcgtcacaa cacagaagattttgagttatttaccttggatgacgtagatgcagcattcgacaaaattattcagctgaaatattcacaaa cagttcacttaaaaggtaaaggtcatggtttacaaataactccactacctgctggtcacatgatcggaggcacaatatgg aagattgtcaaagatggggaggaggaaataatctacgcggtggactacaatcataaaaaggagagacatttgaatggatg tgtgttagagaatatttcccgtccttccctcatgatcactgatgcttttaacgctacatatgtacagtccaggaggaggg ctcgggacgaacaactgatgactctgcttaataatgtcagctttaatgtggtggaatttgcaaaatctcaagttgagtgg atgagtgacagaatcatgcgtgcatttgaagacaacagaaataatccattccactttaaacatatgaaactttgtcataa cttggctgagctggctaaaatacctgaacctaaggttatttacactaaaattatgcgttcttcgagacctctgggtaacc ggaaaagtgaaaggttgtgcgcacgtaatccggataacaacgccatttgccactga |
|
Protein
| Protein ID | pfu_aug1.0_6246.1_52730.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6246.1_52730.t1 MTSIVKLQAFSGTYDESPPCYLLQVDEFRFLLDCGWDEDFNMAFIKEMKRHIHQIDAVLISYPDHAHLGALPYLVGRAGL NCPIYATVPVYKMGQMFMYDLYQSRHNTEDFELFTLDDVDAAFDKIIQLKYSQTVHLKGKGHGLQITPLPAGHMIGGTIW KIVKDGEEEIIYAVDYNHKKERHLNGCVLENISRPSLMITDAFNATYVQSRRRARDEQLMTLLNNVSFNVVEFAKSQVEW MSDRIMRAFEDNRNNPFHFKHMKLCHNLAELAKIPEPKVIYTKIMRSSRPLGNRKSERLCARNPDNNAICH |
|