Gene
| Gene Model ID | pfu_aug1.0_6253.1_31152 |
|---|---|
| Locus | scaffold6253.1 : 16286 ... 19010 : + |
| To GenomeBrowser | scaffold6253.1:16286..19010 |
| Genes list of scaffold | scaffold6253.1 |
| Synonym | pfu_aug2.0_308.1_27205 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6253.1_31152.t1 | 2 | 1 | S-methyl_trans | 31 | 123 | 6.7e-10 | 38.7 | 3.0e-10 | 4.4e-06 | 26.2 |
| pfu_aug1.0_6253.1_31152.t1 | 2 | 2 | S-methyl_trans | 189 | 225 | 6.7e-10 | 38.7 | 3.2e-05 | 0.48 | 9.6 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_6253.1_31152.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6253.1_31152.t1 atgccatcaaaaggattacttgagagattgaatgcaggagagaatctgatcgtagcagagggctatctgtttgaggttga acgccttggatattgcaaagccgggagttttgttccggaagttgttttggacaatccagaacttctgaaaaatattcacc gccagtatgtcaacgccggaagtgacgtagtcctggcatacacagtaagaccatttttcttaaaattttcattcaaagtt aatcagtattacggacatagggcaaaactgagactgatcggtcgtgaagatgagctggaacccttgaacatcaaggcctt acagatagccagagaagtagcagacgagaccggtaccctgatggcgggaaacctctgtaacagtacaatatacagaaaag atgatccagaatctattgaaacatgcagaaagatgaacaagggtccaattgcttgtctcccggttccatacagatgcaca cacgaacatccgacattcttttcaattaacatccctggaactgaaaccagagccttcccattagagttacagacctgtct gagtaccagagatgaggtgagatatttcgctgaggagtgtaagaagattggtgtacagtatgtcggactgtgctgtggta acacacctaactacctcaggatcatcacggaggtatacggtaaggactgccccgccctcaagtacgccccagagatgcac aaacatttcctttacggggacaagacagtgatacatgacaatgactactacaccaaaagcatgaagtacaatgtgtctgg cagggctgaggcatgctag |
|
Protein
| Protein ID | pfu_aug1.0_6253.1_31152.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6253.1_31152.t1 MPSKGLLERLNAGENLIVAEGYLFEVERLGYCKAGSFVPEVVLDNPELLKNIHRQYVNAGSDVVLAYTVRPFFLKFSFKV NQYYGHRAKLRLIGREDELEPLNIKALQIAREVADETGTLMAGNLCNSTIYRKDDPESIETCRKMNKGPIACLPVPYRCT HEHPTFFSINIPGTETRAFPLELQTCLSTRDEVRYFAEECKKIGVQYVGLCCGNTPNYLRIITEVYGKDCPALKYAPEMH KHFLYGDKTVIHDNDYYTKSMKYNVSGRAEAC |
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