Gene
| Gene Model ID | pfu_aug1.0_6259.1_52733 |
|---|---|
| Locus | scaffold6259.1 : 19856 ... 35795 : + |
| To GenomeBrowser | scaffold6259.1:19856..35795 |
| Genes list of scaffold | scaffold6259.1 |
| Synonym | pfu_aug2.0_812.1_07917 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6259.1_52733.t1 | 2 | 1 | DUF812 | 3 | 126 | 0.0 | 297.0 | 6.5e-32 | 6.4e-29 | 100.9 |
| pfu_aug1.0_6259.1_52733.t1 | 2 | 2 | DUF812 | 129 | 246 | 0.0 | 297.0 | 0.0 | 0.0 | 202.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6259.1_52733.t1 | gi|156401085|ref|XP_001639122.1| | predicted protein [Nematostella vectensis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_6259.1_52733.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6259.1_52733.t1 atggacatgctggagccagaagaattacaaaaacaaagagaagaagaggtggatgggctaaagcaggatttaaattcagt agcgtcacgtcttgagaatctagacatagacgttaagaagttaacggccggtatacagcaaatggaagaagaaatcacta cacaggcacggcagaatactgataaagaggaagcgtttaaagtcaaaaaacgaactctcgatcttttacctgatgctgaa aataacatagctaaattacagcaagttgtagacagtagtgctcagagacttgtcaagttagcggagcagtgggaaaaaca tagggtacctctcatagaacaattcagggaccttaaagacctcaactctaaaaaagaggcaggagaatatgagaggatga ctaaagacattaacagatcagcttatacaaaaagaattatggaaattgtctccaatatcaaaaaacaaaaagaggaaata gataaggtattggttgataccaaatcaattcagaaggaaattaacagtttgtcggggaaactagacagaacatttactgt aacagatgaacttattttcagggacgctaagaaagatgaggcagccaagaaagcatacagaaatctggctgctctacatg aaaactgtgaggtgttaataaagacagtagaggatacaggtggaataatgagagaaattagggaacttgaggatcagatt gaacatgaaagtaaaaacaaggtgctatcaaacctagaaaagatcacatctgattaccaacagatgaagaaggagaatat ggcattaatggaaaaacttaaaggcaaatcatga |
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Protein
| Protein ID | pfu_aug1.0_6259.1_52733.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6259.1_52733.t1 MDMLEPEELQKQREEEVDGLKQDLNSVASRLENLDIDVKKLTAGIQQMEEEITTQARQNTDKEEAFKVKKRTLDLLPDAE NNIAKLQQVVDSSAQRLVKLAEQWEKHRVPLIEQFRDLKDLNSKKEAGEYERMTKDINRSAYTKRIMEIVSNIKKQKEEI DKVLVDTKSIQKEINSLSGKLDRTFTVTDELIFRDAKKDEAAKKAYRNLAALHENCEVLIKTVEDTGGIMREIRELEDQI EHESKNKVLSNLEKITSDYQQMKKENMALMEKLKGKS |
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