Gene
| Gene Model ID | pfu_aug1.0_626.1_43754 |
|---|---|
| Locus | scaffold626.1 : 1 ... 13696 : + |
| To GenomeBrowser | scaffold626.1:1..13696 |
| Genes list of scaffold | scaffold626.1 |
| Synonym | pfu_aug2.0_2170.1_02019 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_626.1_43754.t1 | 3 | 1 | Lipoxygenase | 4 | 53 | 0.0 | 257.1 | 0.015 | 220.0 | -0.5 |
| pfu_aug1.0_626.1_43754.t1 | 3 | 2 | Lipoxygenase | 61 | 124 | 0.0 | 257.1 | 4.2e-08 | 0.00063 | 17.8 |
| pfu_aug1.0_626.1_43754.t1 | 3 | 3 | Lipoxygenase | 132 | 460 | 0.0 | 257.1 | 0.0 | 0.0 | 235.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_626.1_43754.t1 | gi|196002601|ref|XP_002111168.1| | hypothetical protein TRIADDRAFT_50085 [Trichoplax adhaerens] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_626.1_43754.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_626.1_43754.t1 gtgaaaaatattccagaagatgagcaattctccttcaatcacaaatggaacatcctcaaaaggaagttaaagatgatcgc tgacaagaaattccagatgctgttttctagcggcaactgggacggattacaacatctgaagaaagtctacacagatacat tcggagaacctctgggttgtacacggtggagcaatgacatattctttggatggcagagaatcaacagtatgaatcattcc ctcgttcagctgtgtacagaaatacctgacaaattaggtgtaacagacgagatgctaagaccgttcttggaaggttggtc actacaacaaatcatagacgccaaacgactcttcatggttgacctaaaggtgctagaggatctgccatgcaaaagtgctg agtacaaagtgttcttaccaacggatccgccctacacgtggatgatggccaaaatgtggtacaatctagcagatgcatcc taccatcagtctctcacacatttaggttttactcacctgattatggagggtattgtcgtctgcgcacaccggaacttgtc tccgtctcatccgctcttcaagcttctcgcaccacacttcctgtacctcatcgccataaatacacgaggtttggaattat tagttgctccaggtggatgggtggacaaaacaatgaatatcggtacaaagggaatgttcaacctcatagcaagagggatg gcgttttggagaatggacgttcacggcactctaccagaggaactaaaacaaagaggggtctactgccgtaacgggaaagt gctcccgaattactacttccgggatgacgcaatactgctgtacgaagcaataaaaaattacgtcaccaaatacgtcaaac tatattatgatacacctgataaaataaaggaagactgggaactgcagaacttcggccaagaaataacaaaatccagagat gaagggggatgcggaatactgggtgtaccaaacaatggtaaatttgaaacggcggaccacattattcttgtgttcacaag catcatttacacgtgcagtgttgcgcatgcgtcgacaaatttccctcagtatgacgagtacgcctttcctccgaactacc cagcgtccatgaaaggcgaaccacccaaagacaagcgagagttgacggaggacgacatcctcagaacgcttccggacaag gagacaaccctggatattatgacggtgaccaagattctgagtgacagaggaacaaacagtcttggagactttgaagtgca atatgtgtttgaacccaaagcaaagaaaatcgtagaagaatttagagaggatctgaagaatattagcgcagaaatcaaga agagaaacgagcatagaaatccaaaatatacgtggttagatcccgaggttgttccgaattctataagcatttag |
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Protein
| Protein ID | pfu_aug1.0_626.1_43754.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_626.1_43754.t1 VKNIPEDEQFSFNHKWNILKRKLKMIADKKFQMLFSSGNWDGLQHLKKVYTDTFGEPLGCTRWSNDIFFGWQRINSMNHS LVQLCTEIPDKLGVTDEMLRPFLEGWSLQQIIDAKRLFMVDLKVLEDLPCKSAEYKVFLPTDPPYTWMMAKMWYNLADAS YHQSLTHLGFTHLIMEGIVVCAHRNLSPSHPLFKLLAPHFLYLIAINTRGLELLVAPGGWVDKTMNIGTKGMFNLIARGM AFWRMDVHGTLPEELKQRGVYCRNGKVLPNYYFRDDAILLYEAIKNYVTKYVKLYYDTPDKIKEDWELQNFGQEITKSRD EGGCGILGVPNNGKFETADHIILVFTSIIYTCSVAHASTNFPQYDEYAFPPNYPASMKGEPPKDKRELTEDDILRTLPDK ETTLDIMTVTKILSDRGTNSLGDFEVQYVFEPKAKKIVEEFREDLKNISAEIKKRNEHRNPKYTWLDPEVVPNSISI |
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