Gene
| Gene Model ID | pfu_aug1.0_626.1_43755 |
|---|---|
| Locus | scaffold626.1 : 25356 ... 33767 : + |
| To GenomeBrowser | scaffold626.1:25356..33767 |
| Genes list of scaffold | scaffold626.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_626.1_43755.t1 | 1 | 1 | Lipoxygenase | 10 | 222 | 9.2e-30 | 103.2 | 7.6e-34 | 1.1e-29 | 102.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_626.1_43755.t1 | gi|260800484|ref|XP_002595160.1| | hypothetical protein BRAFLDRAFT_118620 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_626.1_43755.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_626.1_43755.t1 atggcattttggagaatggacgtccatggtactctaccagaggatctaaaacaaagaggtgtatactgccgtaacgggaa agttctcccgaattactacttccgggatgacgcaatactgctgtacgaagcaataaaaaattacgtcacaaaatacatca aactttattatggtaaatattactcaaggtgcttgttgtacaataaagtaattttacatagcattatatacatctccatt gtaaagaatggcaaattttatggtaagggtgtaccaaacaatggaaaatttgaaacggcagaccacattattcttgtgtt tacaagcatcatatacacctgcagtgttgcgcatgcatcgacaaatttccctcagtatgacgagtacgcctttccaccga actacccagcgtctatgaccggcgaaccacccaaagacaagagagagctgacggaggatgacatccttagaacgcttccg gacaaggaaacgaccctggatattatgacggtgaccaagattctgagtgacagaggaacgaacagtcttggagactttga agtgcaatatgtgtttgaacccaaagcaaaggaaatcgttgaagaattcagagaagatctgaagaatattagcgcagaaa tcaagaagagaaacgagcatagaaatccaaaatacacgtggttagatcccgaggcggttccgaattcgataagcatataa |
|
Protein
| Protein ID | pfu_aug1.0_626.1_43755.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_626.1_43755.t1 MAFWRMDVHGTLPEDLKQRGVYCRNGKVLPNYYFRDDAILLYEAIKNYVTKYIKLYYGKYYSRCLLYNKVILHSIIYISI VKNGKFYGKGVPNNGKFETADHIILVFTSIIYTCSVAHASTNFPQYDEYAFPPNYPASMTGEPPKDKRELTEDDILRTLP DKETTLDIMTVTKILSDRGTNSLGDFEVQYVFEPKAKEIVEEFREDLKNISAEIKKRNEHRNPKYTWLDPEAVPNSISI |
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