Gene
Gene Model ID | pfu_aug1.0_62699.1_56338 |
---|---|
Locus | scaffold62699.1 : 3146 ... 3898 : + |
To GenomeBrowser | scaffold62699.1:3146..3898 |
Genes list of scaffold | scaffold62699.1 |
Synonym | NA |
Manual annotation
Study field | Biomineralization |
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Gene name | N19-C2 |
Description | NCBI BLASTP best hit to BAK57299 |
mRNA evidence |
Study field | Biomineralization |
---|---|
Gene name | Pfu-000496-1 |
Description | NCBI blastx best hit to BAK57299.1. The amino acid sequence of this gene is similar to that of N19. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_62699.1_56338.t1 | gi|342330714|dbj|BAK57299.1| | nacre protein [Pinctada fucata] | 2.0e-38 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues | |
mantle | 1 |
mantleEdge | 1 |
mantlePallium | 1 |
Transcript
Transcript ID | pfu_aug1.0_62699.1_56338.t1 |
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Definition | - |
>pfu_aug1.0_62699.1_56338.t1 atgatactggcagttgtctgcatttttcttatgacggtagtcacaaatgcaagatggaattgctgtgattaccgctttac gggatacaatgatgttggaaaattcaatatggtgtattttgacagacatcttcttagatgcgatagaaatggtatgaggc aatttaaattagacagaggtccaggcaaaattcgttttgaatatgaatgctgtaggctacccagaagacagagaacccat acttttcagacagtctatacatatgacgggaacggtaaccttgtataccttgaccgccaaacagtgtcatgtggaaataa tggcatcatctccggcttcaatctcttaagaaaccctcgccatgaccacatccgattcaacgtcatttgtaaccaataca aaagattgtcatgtcattccatgcaatacactccctataatgatgctggtcgtggagagtctgtctatttggaccgccac agggtgaaatgctctccaggctacttcttgaacagttggggactcaaacgttcaggagaccataaacatattcggattgc ctacagatgctgccgaccgtataaatatcctaaatga |
Protein
Protein ID | pfu_aug1.0_62699.1_56338.t1 |
---|---|
Definition | - |
>pfu_aug1.0_62699.1_56338.t1 MILAVVCIFLMTVVTNARWNCCDYRFTGYNDVGKFNMVYFDRHLLRCDRNGMRQFKLDRGPGKIRFEYECCRLPRRQRTH TFQTVYTYDGNGNLVYLDRQTVSCGNNGIISGFNLLRNPRHDHIRFNVICNQYKRLSCHSMQYTPYNDAGRGESVYLDRH RVKCSPGYFLNSWGLKRSGDHKHIRIAYRCCRPYKYPK |