Gene
| Gene Model ID | pfu_aug1.0_62699.1_56338 |
|---|---|
| Locus | scaffold62699.1 : 3146 ... 3898 : + |
| To GenomeBrowser | scaffold62699.1:3146..3898 |
| Genes list of scaffold | scaffold62699.1 |
| Synonym | NA |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | N19-C2 |
| Description | NCBI BLASTP best hit to BAK57299 |
| mRNA evidence |
| Study field | Biomineralization |
|---|---|
| Gene name | Pfu-000496-1 |
| Description | NCBI blastx best hit to BAK57299.1. The amino acid sequence of this gene is similar to that of N19. |
| mRNA evidence |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_62699.1_56338.t1 | gi|342330714|dbj|BAK57299.1| | nacre protein [Pinctada fucata] | 2.0e-38 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_62699.1_56338.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_62699.1_56338.t1 atgatactggcagttgtctgcatttttcttatgacggtagtcacaaatgcaagatggaattgctgtgattaccgctttac gggatacaatgatgttggaaaattcaatatggtgtattttgacagacatcttcttagatgcgatagaaatggtatgaggc aatttaaattagacagaggtccaggcaaaattcgttttgaatatgaatgctgtaggctacccagaagacagagaacccat acttttcagacagtctatacatatgacgggaacggtaaccttgtataccttgaccgccaaacagtgtcatgtggaaataa tggcatcatctccggcttcaatctcttaagaaaccctcgccatgaccacatccgattcaacgtcatttgtaaccaataca aaagattgtcatgtcattccatgcaatacactccctataatgatgctggtcgtggagagtctgtctatttggaccgccac agggtgaaatgctctccaggctacttcttgaacagttggggactcaaacgttcaggagaccataaacatattcggattgc ctacagatgctgccgaccgtataaatatcctaaatga |
|
Protein
| Protein ID | pfu_aug1.0_62699.1_56338.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_62699.1_56338.t1 MILAVVCIFLMTVVTNARWNCCDYRFTGYNDVGKFNMVYFDRHLLRCDRNGMRQFKLDRGPGKIRFEYECCRLPRRQRTH TFQTVYTYDGNGNLVYLDRQTVSCGNNGIISGFNLLRNPRHDHIRFNVICNQYKRLSCHSMQYTPYNDAGRGESVYLDRH RVKCSPGYFLNSWGLKRSGDHKHIRIAYRCCRPYKYPK |
|