Gene
| Gene Model ID | pfu_aug1.0_627.1_00433 |
|---|---|
| Locus | scaffold627.1 : 69905 ... 72715 : - |
| To GenomeBrowser | scaffold627.1:69905..72715 |
| Genes list of scaffold | scaffold627.1 |
| Synonym | pfu_aug2.0_1185.1_18160 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_627.1_00433.t1 | 1 | 1 | UPF0029 | 303 | 401 | 2.5e-18 | 65.7 | 1.8e-21 | 5.2e-18 | 64.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_627.1_00433.t1 | gi|347837674|emb|CCD52246.1| | similar to related to impact protein [Botrytis cinerea T4] | 1.0e-14 |
Transcript
| Transcript ID | pfu_aug1.0_627.1_00433.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_627.1_00433.t1 atgcctttgtcaacaagaaacaccccaaaccgggacgtaaatacaaaggtgacacaggtgactggtcatcaagtacacac tgacgaaatggcgaaggcgatagctcaattacctgttatacaagaaagtttgagtgaaattaattatcggctgaaaaagt tagaacctattgaatcagttataaatgatacaaaagaggatatctggggacctgacggaatagaccagagaatcaaggaa actgcagaattatctgtccataacgaggcggatatccatgagttaagagacgagaatgcagtgcttaaaaaagaattaca gttacttaaagcggttgttattaatatggacagaaagctaactgcccaaggaaaccagatcacggaactgcggatgcgat ccatgcgtgataacatcttaatccacaatctacaggagcatgaagatgaggacctagaaaaagagatcccctctgcaata aaaacgtacctgggagtagacgtaaatttcgtcaggatacacaggaatggaccctcgggaaataatggaaaaccgagatc tataacagggaaattggttgaccgtcaaacaaagtacgaattactgaatgcccagagagaggcaagaagagctaaaaaga ccattccattctcaattacaccacaatctccgcctgaggtatacgaacagagaaaaaaacaggaggacgtgagtacccag ttgaaaaatcgaggaattaaaactcgcttttcgggagataagctattactggcggatggatctgtgtatagagacaaagt acagaatccacgcgctgaagacgtattaaccgtggattccgatgaaagagcacatctagagaaaatcgagacgaaagtta caaagacaatcgtcgagatgggcaataaatttaaaggaaccatgaaaacagtgaaaagcatcagtgaagtacgagatgtg tacaaaaaggtgatatccgacccccgacatgcgactgcaaatcacaatattctcgtatatcgaaccgaagaagaagatgg cttttgcgatgatcgagaatttggtgcagggaagcgcttacttaaacaactgagagacaatgacgttaaaaatgtcgtta tagtggtgtctagatggtacagaggtcagggaattggagcaaaaagatttaaaatcctggagcaagtggtaaacgatgcc atgcatgagttgaagaaaaagtaa |
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Protein
| Protein ID | pfu_aug1.0_627.1_00433.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_627.1_00433.t1 MPLSTRNTPNRDVNTKVTQVTGHQVHTDEMAKAIAQLPVIQESLSEINYRLKKLEPIESVINDTKEDIWGPDGIDQRIKE TAELSVHNEADIHELRDENAVLKKELQLLKAVVINMDRKLTAQGNQITELRMRSMRDNILIHNLQEHEDEDLEKEIPSAI KTYLGVDVNFVRIHRNGPSGNNGKPRSITGKLVDRQTKYELLNAQREARRAKKTIPFSITPQSPPEVYEQRKKQEDVSTQ LKNRGIKTRFSGDKLLLADGSVYRDKVQNPRAEDVLTVDSDERAHLEKIETKVTKTIVEMGNKFKGTMKTVKSISEVRDV YKKVISDPRHATANHNILVYRTEEEDGFCDDREFGAGKRLLKQLRDNDVKNVVIVVSRWYRGQGIGAKRFKILEQVVNDA MHELKKK |
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