Gene
| Gene Model ID | pfu_aug1.0_6277.1_23988 |
|---|---|
| Locus | scaffold6277.1 : 2804 ... 28555 : - |
| To GenomeBrowser | scaffold6277.1:2804..28555 |
| Genes list of scaffold | scaffold6277.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6277.1_23988.t1 | 1 | 1 | Hydrolase | 106 | 437 | 2.7e-13 | 50.8 | 2.2e-16 | 8.2e-13 | 49.2 |
| pfu_aug1.0_6277.1_23988.t1 | 2 | 1 | HAD | 108 | 377 | 1.4e-07 | 31.8 | 1.9e-06 | 0.0069 | 16.5 |
| pfu_aug1.0_6277.1_23988.t1 | 1 | 1 | Hydrolase_like2 | 215 | 302 | 4.3e-08 | 33.0 | 2.8e-11 | 1.0e-07 | 31.7 |
| pfu_aug1.0_6277.1_23988.t1 | 2 | 2 | HAD | 401 | 434 | 1.4e-07 | 31.8 | 2.2e-05 | 0.083 | 13.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6277.1_23988.t1 | gi|326916929|ref|XP_003204757.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 3 |
| egg-Dshape | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_6277.1_23988.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6277.1_23988.t1 atgtaccccggaagatatgatgaagaagatgacgacgatgatgattgtatggataacgttccattaatgtttaacgaaga agttagttttgaaatgggggaaagtgaatctctagtggacaggcgatccagaaatccaaatcagtcccatctgagctacc tttgtaatgaaggcatctcaggcctttgtggcagtttgcgagtaaatcttgacatgggcaaggcagcatactcattcttc atacagcgtgacaaagctataccggacacgatagctcgtagtacgaccataccggaggaacttggcagaatcagctattt actatctgataaaaccggcactcttacgcagaatgaaatggtgttcaaaaaacttcacttaggaacagtctcatactcat cagaaacgatggatgaggtatcctcacacataagaaccatgtacacacaactccaacaaaaggagactcagcagtcctca atgcagcccaaccttggcccgacagccacaccctcccgagggacgggtccagtacgtaggacggtcataacccgggtatt tgaggcagtacgggctatagccctgtgtcacaatgtcacgcccgtctatgaggacacagatggcgccaccagtgatgaga cggaggccgaccaacaaagtcatcagacggtggtgtaccaggcatcgagtcctgatgaggtagcactggtatcatggacg gaagatgtaggtctgacgttagtgaagagagatctgacacacatgcagctacgtacaccgacaggaaatctggtcggata tcatatactacaagtattccctttcacctcggaaactaaaaggatgggaatcatagtcaaggatgaaagcactggagaaa taatattctacatgaaaggggctgatgtagtcatgcagacaattgtacagtataacgactggctagaggaagagtcccga taccatcaggctaagatgagtgtgcaggatcgtaacgctaaggtccaagctgtgatagagagcttagagagagacatgga gcttctctgtctgacaggagttgaggataaactacaagacggcgtcagacctacactagaaatgctgaaaaatgctggca taaaggtttgtttgaagtactatgagcatgagtttgtagagttggcgtgtcagtgtccgtgtgttgtcgtgtgtcgatgc tccccgactcaaaaagcggagattgtcaaactgctgagaatacacacaggaaaacgtacatgtgcaataggtgatggagg aaatgatgtcagtatgatacaggcagccaatgtaggtgtgggaatcgtcggaaaggaggggaagcaggcatctttagcag ctgatttctccatcacacagttcagtcatataggacgattattaatggtacatggtagaaatagctataagcgttcagca tctctaagccagtttgttatgcacagagggttgatcatttctaccatgcaggccgttttctgttctgtcttctattttgc ttccgttgcattgtttccgggattcctcatgataggatattccacagtgtataccatgtatccagtattttcattggttc ttgacaaggatgtatctgctgaggttgccatgacgtatccagaactttataaagaactagtcaagttgaaaattgcgtca aatcttgtgatgtcgggtcttaggatgtgtaaaatgcaagtcaactgcggtaatgtgaaaattgtctactga |
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Protein
| Protein ID | pfu_aug1.0_6277.1_23988.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6277.1_23988.t1 MYPGRYDEEDDDDDDCMDNVPLMFNEEVSFEMGESESLVDRRSRNPNQSHLSYLCNEGISGLCGSLRVNLDMGKAAYSFF IQRDKAIPDTIARSTTIPEELGRISYLLSDKTGTLTQNEMVFKKLHLGTVSYSSETMDEVSSHIRTMYTQLQQKETQQSS MQPNLGPTATPSRGTGPVRRTVITRVFEAVRAIALCHNVTPVYEDTDGATSDETEADQQSHQTVVYQASSPDEVALVSWT EDVGLTLVKRDLTHMQLRTPTGNLVGYHILQVFPFTSETKRMGIIVKDESTGEIIFYMKGADVVMQTIVQYNDWLEEESR YHQAKMSVQDRNAKVQAVIESLERDMELLCLTGVEDKLQDGVRPTLEMLKNAGIKVCLKYYEHEFVELACQCPCVVVCRC SPTQKAEIVKLLRIHTGKRTCAIGDGGNDVSMIQAANVGVGIVGKEGKQASLAADFSITQFSHIGRLLMVHGRNSYKRSA SLSQFVMHRGLIISTMQAVFCSVFYFASVALFPGFLMIGYSTVYTMYPVFSLVLDKDVSAEVAMTYPELYKELVKLKIAS NLVMSGLRMCKMQVNCGNVKIVY |
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