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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_6286.1_31155
Locus scaffold6286.1 : 28076 ... 35608 : +
To GenomeBrowser scaffold6286.1:28076..35608
Genes list of scaffold scaffold6286.1
Synonym pfu_aug2.0_756.1_21129

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_6286.1_31155.t1 1 1 TMC 72 142 7.7e-22 77.8 9.5e-26 1.4e-21 76.9

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_6286.1_31155.t1 gi|157112276|ref|XP_001657472.1| AAEL000967-PA [Aedes aegypti] 4.0e-19

Transcript
Transcript IDpfu_aug1.0_6286.1_31155.t1
Definition-
>pfu_aug1.0_6286.1_31155.t1
atgctgcggttgtcatctctcctaactatgatgtttgcgttgtacattatcgtgaataaccgatgtgagaaccttggaaa
agatatctcctgtaacgacacacgaacatcctgggcacttaatcctgacgacaaatatccgtacacttgtggaaatcgta
agtggtttggtgaagtagtgaacagtacagtgcaagaatcaactcaaatcaagtgttgggagacctatgtaggacagcag
atttacaagcttgtcatcatggacttcttagtggttgtcttagtaacatttattgttgaatatccaagagggttgatata
caagaaattcaatggtagagtgaagattgttgatttgataggtcaacaagagtttgatttaccgaaagctgttctagacc
tggtgtacctacagactctatgttgggatccctcatgcataattgtacacagccgactcgagccgtaa

Protein
Protein IDpfu_aug1.0_6286.1_31155.t1
Definition-
>pfu_aug1.0_6286.1_31155.t1
MLRLSSLLTMMFALYIIVNNRCENLGKDISCNDTRTSWALNPDDKYPYTCGNRKWFGEVVNSTVQESTQIKCWETYVGQQ
IYKLVIMDFLVVVLVTFIVEYPRGLIYKKFNGRVKIVDLIGQQEFDLPKAVLDLVYLQTLCWDPSCIIVHSRLEP

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