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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_62904.1_12978
Locus scaffold62904.1 : 1 ... 3770 : -
To GenomeBrowser scaffold62904.1:1..3770
Genes list of scaffold scaffold62904.1
Synonym pfu_aug2.0_11.1_03385

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_62904.1_12978.t1 1 1 FAD_binding_2 18 63 1.9e-06 27.0 4.0e-09 3.0e-06 26.3
pfu_aug1.0_62904.1_12978.t1 2 1 Pyr_redox_3 19 61 1.4e-08 35.0 3.3e-10 2.4e-07 31.0
pfu_aug1.0_62904.1_12978.t1 1 1 NAD_binding_8 20 85 5.2e-15 55.2 1.4e-17 1.0e-14 54.2
pfu_aug1.0_62904.1_12978.t1 1 1 Amino_oxidase 25 325 7.00649e-45 153.9 0.0 6.5861e-44 150.7
pfu_aug1.0_62904.1_12978.t1 2 2 Pyr_redox_3 223 272 1.4e-08 35.0 0.26 200.0 1.9

Transcript
Transcript IDpfu_aug1.0_62904.1_12978.t1
Definition-
>pfu_aug1.0_62904.1_12978.t1
atgcttacgaaactttgttacgaaatcttccttcgattcatgagccagagggtggtgattatcggagctggggtggcggg
actgagcgctgccaggactctcatggacaatggcatcgatgatttcctgatagtagaagcgcaagacaggatcggcggta
gggtgcataccctatactcagacggaaatgtactggagttaggtgctcagtggatacacggagaggaagggaacgaggtg
tttgagctggcagacaaaggcaacttgatatggaacaaggaacacggggacaaacacagcccttccggagcgtcaaagta
tttgaatcatgacttctgtaagacagatgggacaataattgatagagatatcgtcactgatacatgccatgccttggagg
acatatacacggatctgaacagctgtgatcatgtgacacatgagtaccagaatctccaagatgagtataacgccaggttt
cagaagcttatagactcaaatgatctgaaaggcgacgtcagagaacagaaacgtgggatttatcggtggagaacagcgtt
cgagatccatgacaacgcgtgttactcgctacgtgacgtcaagtgcccgtgccgctacacgccctgtgaaggcaacggtc
tggtagaacttcagaacgggtttcaatccgttttggacacgatacttcaaaatgtgcccagagataaaatacttcttaac
acccctgttaaaactatacactggaatcacagttctagtacttgcagaaccgaatgcgagtccggaatgtctttgatttg
tgatcaagttatcttaacgtcatcgataggttatcttaaaaaaaaccatttaactatgttcaatccaaatctccctccaa
caaaacttcagaccattgagaataccggatatggaagtgtgcttaaaatattcttagaatgggagatgccattttggagt
gagggatttaaaggaattcaattcgtatgggactgtgatatcgataatgtggacagtcaaataaaagaggtaagtgtatt
tccttattggcttaaaaatgacaccgcaaaacacactataggagctattaaaaatctgccctga

Protein
Protein IDpfu_aug1.0_62904.1_12978.t1
Definition-
>pfu_aug1.0_62904.1_12978.t1
MLTKLCYEIFLRFMSQRVVIIGAGVAGLSAARTLMDNGIDDFLIVEAQDRIGGRVHTLYSDGNVLELGAQWIHGEEGNEV
FELADKGNLIWNKEHGDKHSPSGASKYLNHDFCKTDGTIIDRDIVTDTCHALEDIYTDLNSCDHVTHEYQNLQDEYNARF
QKLIDSNDLKGDVREQKRGIYRWRTAFEIHDNACYSLRDVKCPCRYTPCEGNGLVELQNGFQSVLDTILQNVPRDKILLN
TPVKTIHWNHSSSTCRTECESGMSLICDQVILTSSIGYLKKNHLTMFNPNLPPTKLQTIENTGYGSVLKIFLEWEMPFWS
EGFKGIQFVWDCDIDNVDSQIKEVSVFPYWLKNDTAKHTIGAIKNLP

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