Gene
| Gene Model ID | pfu_aug1.0_6299.1_09308 |
|---|---|
| Locus | scaffold6299.1 : 19896 ... 27194 : + |
| To GenomeBrowser | scaffold6299.1:19896..27194 |
| Genes list of scaffold | scaffold6299.1 |
| Synonym | pfu_aug2.0_711.1_04500 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6299.1_09308.t1 | 3 | 1 | CUB | 37 | 138 | 0.0 | 187.8 | 1.5e-21 | 2.2e-17 | 63.1 |
| pfu_aug1.0_6299.1_09308.t1 | 3 | 2 | CUB | 155 | 215 | 0.0 | 187.8 | 1.4e-17 | 2.0e-13 | 50.3 |
| pfu_aug1.0_6299.1_09308.t1 | 3 | 3 | CUB | 217 | 326 | 0.0 | 187.8 | 8.1e-25 | 1.2e-20 | 73.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6299.1_09308.t1 | gi|297478049|ref|XP_002689817.1| | 1.0e-23 |
Transcript
| Transcript ID | pfu_aug1.0_6299.1_09308.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6299.1_09308.t1 atgaggattattttacatataataaattttatttcacagttatctatctattctggatcaataatcgattactacgcacc accatgtagtgacgtattctcagacgtacagacaggtaccatacgcttacctaccaccatagaggggacgtattcccctt ttatgagctgccgatgggagataaccgcaccacctcatcactccgttgtgttggtttcctcggatttcgctatagaggac tcaaataattgccaatgggatcacgtggaggtaagagatggtaacgaaagcaccaccaccggatacatattttgtggcta ccaacagttagcatacttatcacagtccagctcggtgtttgtctattttacttctgacgctctgtaccaggaccgaggct tcgtcttgcatttctacatagtcgataatgacgcccacgatacctccatgtgtaatagaacaattgaccgtgaaatgtac atcaccagtccaaattacccctcacgctacccaccaaatgctttatgcctatatagaattcaggcatccccaggacacca cgcggtattgtccatagaggaaattcaactggacgatgagaactgtctgcatgataatgtagaaatatttgatggcgaaa ctagtcgatgtgatttgaatataacaacacagatggaaggtaccattagtagtcctaactacccattcaattatcccaat aaaaaagactgcgctataaccatttgggcgccgttaccggatcaccaggtccgacttaacataactgttctagatatgga ggaatcggagaactgctcatttgattacctggctattgctggtacacgcggtcaacacaatccaaaactatgtggatatt ggaactcctctttggtttaccagtcttctacagagataatgcagatacgatttcattcggatgacttcattactgaacgt gggtttcatgccagttttactatagtacctaaagatgatacgagtttcggatatttgaatcctcgtcagtag |
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Protein
| Protein ID | pfu_aug1.0_6299.1_09308.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6299.1_09308.t1 MRIILHIINFISQLSIYSGSIIDYYAPPCSDVFSDVQTGTIRLPTTIEGTYSPFMSCRWEITAPPHHSVVLVSSDFAIED SNNCQWDHVEVRDGNESTTTGYIFCGYQQLAYLSQSSSVFVYFTSDALYQDRGFVLHFYIVDNDAHDTSMCNRTIDREMY ITSPNYPSRYPPNALCLYRIQASPGHHAVLSIEEIQLDDENCLHDNVEIFDGETSRCDLNITTQMEGTISSPNYPFNYPN KKDCAITIWAPLPDHQVRLNITVLDMEESENCSFDYLAIAGTRGQHNPKLCGYWNSSLVYQSSTEIMQIRFHSDDFITER GFHASFTIVPKDDTSFGYLNPRQ |
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