Gene
| Gene Model ID | pfu_aug1.0_63.1_14765 |
|---|---|
| Locus | scaffold63.1 : 53129 ... 68565 : - |
| To GenomeBrowser | scaffold63.1:53129..68565 |
| Genes list of scaffold | scaffold63.1 |
| Synonym | pfu_aug2.0_408.1_27350 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_63.1_14765.t1 | 1 | 1 | RRM_1 | 168 | 216 | 4.9e-09 | 35.7 | 2.4e-12 | 1.2e-08 | 34.4 |
| pfu_aug1.0_63.1_14765.t1 | 1 | 1 | RRM_6 | 168 | 216 | 6.5e-06 | 26.0 | 3.6e-09 | 1.8e-05 | 24.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_63.1_14765.t1 | gi|348515569|ref|XP_003445312.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_63.1_14765.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_63.1_14765.t1 atgtcttttaaccaaggtttaattggtcctcaaatgcccttagatcctatgagaaacaaccagcctttacagttcaacac aaataaaggaaagcctcctatgccagtagagggggacttggacagaaatgatccctacccagacagcagcaccccggggg agatgatgggtggcggaggcatgtatggaggaccatccgggccagggatgggagacatgagcttccctgggggaaacatg atgcagggtgggggaaacatgatgcaggggaatatgatgggatcagatccgaacatgatgatgatgttcaatcagtatgg taacctcggacccaatggtcctaacttaggttccagtggtccatggttaaaccagaacatcattaatcctatattcctcc ctaaagaaatcatcacactcaagagctcagtcctgtatcctcctccaccaaatgctgccccacccacaacaagggagaga cccccagggtgtcgtacagcatttgttggaggtctaccagaaaacgtcacagaagatatgattctagagatatttgagaa ttttggtgttatttgcagtatcagaaaaggaaagaaaaatttctgtcatattcgttttgagttggaagacagtgtggaca gatctttatacatatctggctataggatgaagattgaggataaggatgacaagcctaacacgggccgactccacgtggat tacgccatggcgcgagacgaccagtacgagtttgagtgtaagcagaggatgatggctcgagagatgagacatagacagag attagaggaggagagaatacgaccaccaagtccaccacctattgtacacttcagtgatcatgaagccaatagtctgatgg acagacttaaatctgaggatggtttcatgaaggcatctctgatcctgctaacatggctagaaagaggggatctcaccaag cgtaatgttaacatcttctacagcatggtacagtgtacgaactcccaggtcaggcggcttatggcagaaaaacaacagca cgaagaagagctcgtcaaaatgaaggaaaatttcaaaaagatttttgaaggaattttacatcagtttgatcagattgaga aagtctttagcctagctcacaagcagaggaactgggatcatttcagtaaggctcagcgaaagaatatagaactctggttc agacaagcccagatcaagaatgattttcagattgacgccaagaaaaatccctacgtggctttttgcatcacaggctggat atag |
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Protein
| Protein ID | pfu_aug1.0_63.1_14765.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_63.1_14765.t1 MSFNQGLIGPQMPLDPMRNNQPLQFNTNKGKPPMPVEGDLDRNDPYPDSSTPGEMMGGGGMYGGPSGPGMGDMSFPGGNM MQGGGNMMQGNMMGSDPNMMMMFNQYGNLGPNGPNLGSSGPWLNQNIINPIFLPKEIITLKSSVLYPPPPNAAPPTTRER PPGCRTAFVGGLPENVTEDMILEIFENFGVICSIRKGKKNFCHIRFELEDSVDRSLYISGYRMKIEDKDDKPNTGRLHVD YAMARDDQYEFECKQRMMAREMRHRQRLEEERIRPPSPPPIVHFSDHEANSLMDRLKSEDGFMKASLILLTWLERGDLTK RNVNIFYSMVQCTNSQVRRLMAEKQQHEEELVKMKENFKKIFEGILHQFDQIEKVFSLAHKQRNWDHFSKAQRKNIELWF RQAQIKNDFQIDAKKNPYVAFCITGWI |
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