Gene
| Gene Model ID | pfu_aug1.0_63.1_14768 |
|---|---|
| Locus | scaffold63.1 : 90336 ... 103546 : + |
| To GenomeBrowser | scaffold63.1:90336..103546 |
| Genes list of scaffold | scaffold63.1 |
| Synonym | pfu_aug2.0_408.1_27351 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_63.1_14768.t1 | 2 | 1 | RBP_receptor | 1 | 98 | 1.20512e-43 | 149.3 | 0.00055 | 4.1 | 5.6 |
| pfu_aug1.0_63.1_14768.t1 | 2 | 2 | RBP_receptor | 65 | 253 | 1.20512e-43 | 149.3 | 0.0 | 1.20512e-43 | 149.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_63.1_14768.t1 | gi|291230434|ref|XP_002735171.1| | 1.0e-28 |
Transcript
| Transcript ID | pfu_aug1.0_63.1_14768.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_63.1_14768.t1 atggtgtccgtcttaacagtttccttcattgttatctacaatatcaccgtgggttctatacgttacgtagtttggttgac tggagagattatgaagatgattgacaaaggaataaattatgtagactacttgacaatcctgagaggttacgaacaagaag caactgaactgctcaatgctgccaagtactcagttttctgtgtccgaggatttctgatccagtttctgctgttgacctta gtggcttcgattctaactgccgtcatacagctttggtcattcctggacacctggattattgacaaaatacatgccctttg gcggctattcttcatcatgacgtactttatgttcttctacaacatcttcattggtttggtatcgtgtcttttgcgcatcc ttaaatctatgatcctcggttcattgttcataccgcggcttgaccatagtgtattaccgaggaaattccagagatttgat cctggattccatgccttctgtgggtttatgcatgttgaaagcgcgcatacccacccggtcataatggtgtttatcagtat tttacaagcagagtccttcaacactctcaaagctaacagtgaaaaaccctcactcaagtctatgatgggtaagggcattg ctaccgtgaatggtacatatgatatggcacagagtaaacgcagcagaaaggcccgatggaagtggttattagcctatacc ctgatccagaaccccaccctgtgtctggagagaaagatagcactggctaaacagaaaaatgagtcaattataatgacagt gttacaggataattacgaggcgactccagcggaggaaaaaatcgacatccaaatctga |
|
Protein
| Protein ID | pfu_aug1.0_63.1_14768.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_63.1_14768.t1 MVSVLTVSFIVIYNITVGSIRYVVWLTGEIMKMIDKGINYVDYLTILRGYEQEATELLNAAKYSVFCVRGFLIQFLLLTL VASILTAVIQLWSFLDTWIIDKIHALWRLFFIMTYFMFFYNIFIGLVSCLLRILKSMILGSLFIPRLDHSVLPRKFQRFD PGFHAFCGFMHVESAHTHPVIMVFISILQAESFNTLKANSEKPSLKSMMGKGIATVNGTYDMAQSKRSRKARWKWLLAYT LIQNPTLCLERKIALAKQKNESIIMTVLQDNYEATPAEEKIDIQI |
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