Gene
| Gene Model ID | pfu_aug1.0_6302.1_23997 |
|---|---|
| Locus | scaffold6302.1 : 45066 ... 48965 : - |
| To GenomeBrowser | scaffold6302.1:45066..48965 |
| Genes list of scaffold | scaffold6302.1 |
| Synonym | pfu_aug2.0_472.1_07558 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6302.1_23997.t1 | 1 | 1 | NACHT | 15 | 147 | 2.6e-06 | 27.1 | 4.2e-10 | 6.3e-06 | 25.9 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_6302.1_23997.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6302.1_23997.t1 atgaagccacgggattatgacaggctttctgaatgggagaaaactatttcttacttcaagttcgtcttttttattccttt ccacgctgtagacgagaacaaatcttgtataaatcgttggttggaggacacattcgaagatccggatttagacttaccgg actgtaaggaaatcctatatgacgtccttcgtagttcggattatccatgtcttttcatcatggatggcttggacgaatgg aagccgtcagaaaaagtcagatcgggcctgcgatatagcggatttccagatatggacagcgtgtcatgctgctgtctcat gtacacgtgccgaccttggataatggagcgcttacatcctagaatatccggtaatgacagggttatagagatctgggggt tattagatggaggagccgacagggttatggagaaagtccttatcaaccatttcaaagtcaccgacttcgacagtaatcca aaggtagagatgatcaaatctaggtcaaagcacatgaaatgtaaatctctaatgaaaatcccgttctttgccacagcgtt tgttcacctttggtacacaactggtcaggttgaggattccttgactaatttcatcaccacaatgttagaactgctgattg aagatgcaaataggcgaggaaagctgggcccggatatcatggatactttcaacactaaattgagagacaaaccggttgac ttgaaagaattgcagattcccaggctgctccaatcacattatgttttgcagagcatcatctatcctctcctggctccaag taaaacagccttcaattttataatgtcgcgggagtcgatttacatacaggaaagggatttcttcaagaactatgcgggta tttcagaacggatgtttctatatcgttctggtattttgagtacagctgaagcttattcttcggtaaatatcatcacaatc aagctgtctttcatacatcgcttggttacggagtatttggctgccattcatatcattgccaatcccaacaaatggaagcc aagggaacgtttccttactcagtgctccacggtggaaacaatcctggaatttggaaatctcttcaggttgatagcaggta tggaaccggagcttggctgtcagatgaccaatcatatcgtcgatgttctaaaccgacaagtggacatcgatgtttacaga acaacattcggagacaaatcgaaatgtgaggctgtcaaaagagtgttagaagttctttgcgactgcgtacaagaggttca gctgagccaagccttgccacagaaagacaaagaggcattgaagattcgcttagaggacatctacttggatggattatctc ccattgaagtccttactatgacgtcaaaacttcttcaatatcacaacaaggaaatattgtctttgtgtatgtcatcgata ccacacgattttcctggcttgacgaatcccgacctaaatacttttcttgacaaggcttcttccttacaatcactgtgcat aagtgatatgactttacaaaacctcagtaaaaccctagccaacctcaatgttgtcgccttacattacgtccgaatttctt ctgatggactcggggatcttctgtcatctctcaaaaacaatcgacgtctgcagtcactaacacttgagggcgtgtcgagc aatcacgtggctttagatctagatctcacatccagcaaaaatttgtcatttctgtcgcttggttttctacgagtagcaga cgtcaaggcatcgctagctagtatgacacatttgaaactcgatcatctggttggatcaacgaaaactttactacaaaccc tttcaaactgtgaaaatcttgctagtttacatgtctgctacacaaaaagtgccgaagacatggaactcctgcaaagggga attcccctattgaaaaaccttcgaaagatgacgtacgacgcgatagccaatcaaatgaagggtaacatgaggtgcttggc ttcctccgtggaaacgaatttgcctgtcaacacgtaa |
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Protein
| Protein ID | pfu_aug1.0_6302.1_23997.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6302.1_23997.t1 MKPRDYDRLSEWEKTISYFKFVFFIPFHAVDENKSCINRWLEDTFEDPDLDLPDCKEILYDVLRSSDYPCLFIMDGLDEW KPSEKVRSGLRYSGFPDMDSVSCCCLMYTCRPWIMERLHPRISGNDRVIEIWGLLDGGADRVMEKVLINHFKVTDFDSNP KVEMIKSRSKHMKCKSLMKIPFFATAFVHLWYTTGQVEDSLTNFITTMLELLIEDANRRGKLGPDIMDTFNTKLRDKPVD LKELQIPRLLQSHYVLQSIIYPLLAPSKTAFNFIMSRESIYIQERDFFKNYAGISERMFLYRSGILSTAEAYSSVNIITI KLSFIHRLVTEYLAAIHIIANPNKWKPRERFLTQCSTVETILEFGNLFRLIAGMEPELGCQMTNHIVDVLNRQVDIDVYR TTFGDKSKCEAVKRVLEVLCDCVQEVQLSQALPQKDKEALKIRLEDIYLDGLSPIEVLTMTSKLLQYHNKEILSLCMSSI PHDFPGLTNPDLNTFLDKASSLQSLCISDMTLQNLSKTLANLNVVALHYVRISSDGLGDLLSSLKNNRRLQSLTLEGVSS NHVALDLDLTSSKNLSFLSLGFLRVADVKASLASMTHLKLDHLVGSTKTLLQTLSNCENLASLHVCYTKSAEDMELLQRG IPLLKNLRKMTYDAIANQMKGNMRCLASSVETNLPVNT |
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