Gene
| Gene Model ID | pfu_aug1.0_6304.1_09312 |
|---|---|
| Locus | scaffold6304.1 : 1 ... 7925 : - |
| To GenomeBrowser | scaffold6304.1:1..7925 |
| Genes list of scaffold | scaffold6304.1 |
| Synonym | pfu_aug2.0_451.1_04187 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6304.1_09312.t1 | 1 | 1 | NAD_binding_2 | 3 | 61 | 4.5e-09 | 36.3 | 1.5e-12 | 7.6e-09 | 35.6 |
| pfu_aug1.0_6304.1_09312.t1 | 1 | 1 | NAD_binding_11 | 65 | 166 | 6.2e-20 | 71.4 | 1.8e-23 | 8.8e-20 | 70.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6304.1_09312.t1 | gi|260832486|ref|XP_002611188.1| | hypothetical protein BRAFLDRAFT_88413 [Branchiostoma floridae] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_6304.1_09312.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6304.1_09312.t1 atgcaagacacagcagaggcaataaaggcacggggaggcgtgtttctagaagcacctgttgtaggaagcagagttcctgc ccttgaggggcaacttatcattttagccgcaggggagcgcaaactttatgatgagtgttactcctgcttcgaggccatgg gcaaaaaatctctatacttaggtgatgatataggttcagctacacagatgaagttgatcgtaaacatggtaatgggaaca gttgtagcgagcctggcggaaggaatggccatggcggaaaaagttggtctggaccaagaagacgtagcggaagtattctc attaggggctctatcctgccctactgtcatacataaaagtcaagcaatacttagtcagagatatgatccacattttccac ttcaacatcaacagaaagatctgagactttccttattactgggggataaaatagaacagcctctctatgtagcatcagca gctaatgagatttactcgtatcacttttctctttcatgtgacatgttacccattgaaaacaataaaatgacatcgtaccg ctgccatgtgacgactttgtttctttgtcatgagtggttagagtggtgtacgaaaagaaagaagtga |
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Protein
| Protein ID | pfu_aug1.0_6304.1_09312.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6304.1_09312.t1 MQDTAEAIKARGGVFLEAPVVGSRVPALEGQLIILAAGERKLYDECYSCFEAMGKKSLYLGDDIGSATQMKLIVNMVMGT VVASLAEGMAMAEKVGLDQEDVAEVFSLGALSCPTVIHKSQAILSQRYDPHFPLQHQQKDLRLSLLLGDKIEQPLYVASA ANEIYSYHFSLSCDMLPIENNKMTSYRCHVTTLFLCHEWLEWCTKRKK |
|