Gene
| Gene Model ID | pfu_aug1.0_6323.1_45416 |
|---|---|
| Locus | scaffold6323.1 : 57454 ... 65375 : - |
| To GenomeBrowser | scaffold6323.1:57454..65375 |
| Genes list of scaffold | scaffold6323.1 |
| Synonym | pfu_aug2.0_37.1_23309 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6323.1_45416.t1 | 1 | 1 | DNase_II | 20 | 320 | 0.0 | 296.2 | 0.0 | 0.0 | 295.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6323.1_45416.t1 | gi|260810891|ref|XP_002600156.1| | hypothetical protein BRAFLDRAFT_66664 [Branchiostoma floridae] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_6323.1_45416.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6323.1_45416.t1 atgattgtcgtacccaagatggatccgccgtggactggaaatgtcaacatgcttgccagtgacggggcagcttactatta tatggacagtgacaatccgacatggacgttatctaacgtgggcatcaatgaaatgcagggaaatgccgtctatcatacac tccaacagatctatgatgaaaaagacctagacaatatcacctacgcaatgtacaatgacgaaactcctgtaggaacggtg tccatcactcatggacacacaaaaggggcctttgcttttgacacgtcgagtgggttctggttaattgtcagcgtaccaaa gtttcctaatattcgcactggcggctaccagtaccctaaaagtgggttcagatatggacagacaatgctgtgtgtcagtc tgaacaacacggagctcgaagacgtggcggagattatgacctacacataccctaagttctacgacaaacacctaccaaac agttttgctggcagtaatcctactctagcctcattgttccagtacagacagcctcatgtgatctcagccccgtataaact agagaccaccatacacagcaagggggataccatatttcacaactttgccaaagcagcaggattccatgcagatttgtatg atgcttgggtaaatgagcgtattaaccataatctccttgttgaaacatggcagaatggaccaaaaatatacttcatcagg tctaactgtacggagacatataaagtatacaatgtacaggaggtcgcatttcctgtgggcagttttcataaaactaagga ccattctaagtgggcagtatcaaggactggtaaatggacgtgcattggtgacatcaacagacagtatccccagttcaaaa gaggaggaagtactatgtgttttgtaaacaccaaagtttggaatgaattcatccaaaggatcagagactatgagacctgt ggatttgcataa |
|
Protein
| Protein ID | pfu_aug1.0_6323.1_45416.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6323.1_45416.t1 MIVVPKMDPPWTGNVNMLASDGAAYYYMDSDNPTWTLSNVGINEMQGNAVYHTLQQIYDEKDLDNITYAMYNDETPVGTV SITHGHTKGAFAFDTSSGFWLIVSVPKFPNIRTGGYQYPKSGFRYGQTMLCVSLNNTELEDVAEIMTYTYPKFYDKHLPN SFAGSNPTLASLFQYRQPHVISAPYKLETTIHSKGDTIFHNFAKAAGFHADLYDAWVNERINHNLLVETWQNGPKIYFIR SNCTETYKVYNVQEVAFPVGSFHKTKDHSKWAVSRTGKWTCIGDINRQYPQFKRGGSTMCFVNTKVWNEFIQRIRDYETC GFA |
|