Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_63247.1_20336
Locus scaffold63247.1 : 1 ... 3892 : -
To GenomeBrowser scaffold63247.1:1..3892
Genes list of scaffold scaffold63247.1
Synonym pfu_aug2.0_869.1_31238

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_63247.1_20336.t1 1 1 Pkinase 3 79 8.8e-09 34.8 1.9e-12 9.5e-09 34.7
pfu_aug1.0_63247.1_20336.t1 1 1 Pkinase_Tyr 4 79 3.3e-07 29.6 9.6e-11 4.8e-07 29.1

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_63247.1_20336.t1 gi|195108775|ref|XP_001998968.1| GI23330 [Drosophila mojavensis] 9.0e-35

Transcript
Transcript IDpfu_aug1.0_63247.1_20336.t1
Definition-
>pfu_aug1.0_63247.1_20336.t1
gtaacaggttatgacttcaaggcagacatctggagttttggtataacagcaatcgagctagcaacaggtactgcccccta
ccacaaatacccgcctatgaaggtgttgatgctcacgttacagaacgaccctccgagcctggactcgtcagctgaggaca
aagatcagtataaagcgtattctaaagtgttcaggaaaatgatctcagactgtctgaaaaaggaaccagataaaaggtaa

Protein
Protein IDpfu_aug1.0_63247.1_20336.t1
Definition-
>pfu_aug1.0_63247.1_20336.t1
VTGYDFKADIWSFGITAIELATGTAPYHKYPPMKVLMLTLQNDPPSLDSSAEDKDQYKAYSKVFRKMISDCLKKEPDKR

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