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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_6335.1_02214
Locus scaffold6335.1 : 31065 ... 38795 : -
To GenomeBrowser scaffold6335.1:31065..38795
Genes list of scaffold scaffold6335.1
Synonym pfu_aug2.0_868.1_27862

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_6335.1_02214.t1 gi|291238628|ref|XP_002739232.1| 4.0e-24

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
8-16cell 1
egg-Dshape 1
trochophore 1
>Adult tissues
adductorMuscle 1
mantle 1

Transcript
Transcript IDpfu_aug1.0_6335.1_02214.t1
Definition-
>pfu_aug1.0_6335.1_02214.t1
atgcagaagataactttgacagtgctgtcatctgcattgctcatttgttttatgactttatgtttatggatcattggata
caatcaactttatctggatgacgaaagaaaccaagaagatgaagcgaatttgaacttgatcagggaaaacttacgactga
ttcaaaacaagcaacaagtaaagaaaagaaaagatgacatagaaatccagaaacttgttcaaaacagattttcgtggctt
cctaaggccaataccgtttctaatgtgttcataacaccagcatcacacgatgcaatagtacagaatttcaatgccaaaaa
ttcaagcctcgttttcgtccaccaaccacgtggagccggaagtcacgtcacttcctgtatgaattctatctcgattgaaa
agaggcattccttgtcgcctgtgatgaatttgcagaatcgtttactttgggacagttcgagcgtagaaaatcggcagcac
caagaagcagttcagctacacagaggaccctttgcttttggtttatgcgaaaacttaaatagaaagtgcgcatatttcac
cattttcagagatccgttcgacactttagtttcattatttactcattgcaaggcaaatagaaacgatgatttgtgcaaag
agaaatcagcaagtaattcaacattatatgactgggtgttcgaaaacgccggtgttttatttcatagattattattctca
agtgaacactgcaaatataatcataattcgtcagattctacaaatgtcaatattgattcctgtaataatcaccatagaaa
ccgttttgagatgttatcaacaaatacagaaaaaatacatttagccacttatatcaaaagtcaccttcataagtggtttg
ctgctatcgggttattcaatgaaatcgagaactcaatgctgatatttgagagagcgttcgaacacccattttcaagatgc
aagtcacgtgacaagtcttcgttttacgagaactcgcttgtgagtaacaatgctcattttgagagagtaagatccgatga
agacgtttataactacgatgatgatgaagaagaggattttattgatgaaattcaaactgttaaagaagatattaatattc
aaaatgctttaaaatatgattacataatttataatgaagctaaaagattatatcatattcaaaaacaagtgttatataat
aaacttgggaatacctga

Protein
Protein IDpfu_aug1.0_6335.1_02214.t1
Definition-
>pfu_aug1.0_6335.1_02214.t1
MQKITLTVLSSALLICFMTLCLWIIGYNQLYLDDERNQEDEANLNLIRENLRLIQNKQQVKKRKDDIEIQKLVQNRFSWL
PKANTVSNVFITPASHDAIVQNFNAKNSSLVFVHQPRGAGSHVTSCMNSISIEKRHSLSPVMNLQNRLLWDSSSVENRQH
QEAVQLHRGPFAFGLCENLNRKCAYFTIFRDPFDTLVSLFTHCKANRNDDLCKEKSASNSTLYDWVFENAGVLFHRLLFS
SEHCKYNHNSSDSTNVNIDSCNNHHRNRFEMLSTNTEKIHLATYIKSHLHKWFAAIGLFNEIENSMLIFERAFEHPFSRC
KSRDKSSFYENSLVSNNAHFERVRSDEDVYNYDDDEEEDFIDEIQTVKEDINIQNALKYDYIIYNEAKRLYHIQKQVLYN
KLGNT

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