Gene
| Gene Model ID | pfu_aug1.0_6337.1_31168 |
|---|---|
| Locus | scaffold6337.1 : 1 ... 12037 : + |
| To GenomeBrowser | scaffold6337.1:1..12037 |
| Genes list of scaffold | scaffold6337.1 |
| Synonym | pfu_aug2.0_9.1_29951 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6337.1_31168.t1 | 2 | 1 | DUF1126 | 122 | 155 | 1.9e-34 | 116.8 | 6.5e-18 | 9.6e-14 | 50.5 |
| pfu_aug1.0_6337.1_31168.t1 | 2 | 2 | DUF1126 | 322 | 354 | 1.9e-34 | 116.8 | 6.0e-22 | 8.9e-18 | 63.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6337.1_31168.t1 | gi|291231836|ref|XP_002735862.1| | PREDICTED: EF-hand domain-containing family member C2-like [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| 8-16cell | 1 |
| egg-Dshape | 2 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
| mantle | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_6337.1_31168.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6337.1_31168.t1 gaacgttgataagaagacatagaatacccaaacctgcacctaatgatgacgagtactatactgccgaggacttcaatatc ggaaaagaaatcaatctatattccaaagttttcaaaatcacaggatcagatgactttactaagaatttcctcaagaaaat gggagtcagagttaatgaggctgttgatagtccagataatccatatacaaagtacagaaaagctatggatgaaagcatgc agccattaagaccatatgagaagcatgacacactcaaacagttcttagaccatgaccgtcacgtcctacgtttctactgt tactgggacgacacagacagtatgtttggagatccaagggagcttatcttgcactatttcttagctgatgatactattga aatcagagaggtcatacctgcaaactccggacgagatgccgttccgatgttcctgcagcgtggaaaactgcccaaaaaca tagaatccctgcgacagccaggagaaatcacagaccgcacggtactgaatgtgtttggaccaactggacatggtggcaga tacatccttgatagcttgaagactggtgccgtgtacacagatttctacagggacagtgaccttacattgggagctgttct caatgtttggggaaggaaggtccttatatgtgactgtgatgagtttactaaggaatattatagaaacaaatttgggcttg aaacattcccaagtgtcgaatacaaaaaggatcctatgggcatgggacctcgccagttccctccatacaatggctggggc agtgaggaggattctctttgctcttgtatgggtctccttccaaagcctccaaagagggactttatcaagtttatggagaa ggacaggagaggattggatagtaacgtactgagattcctggcacgtatggataccaccaaacccattgacatggataggc gattcatcatctcctacttcctctctgatgacaccatcttagtctttgagcctccagttagaaattcaggtatcattgga ggtaaattccttgaaagaactagaatcaagaagcccaatcagccgttatacagtacagatatgtcccaatactacctagc ttctgacttgcatgtaggagctaacgtcacattcaacagtcataaatttgttctcattgatgctgatgaatatgcattta ggtacatggaggctcatgctggtgagttttcaaaggccaacattaatgcgatcttgaagaaactagtttcaatagtagga aagaacccagatgaagtacgttccttcttcatgaagaacgatccaaaaggatgcggcacgatcggatacgaccagctagt ctctctgctgagacaagttgaccccacaatcacaaatcatgaggttatgactgtggccagatattattctgaaagaactg ctgaagatgctgtggacagccgaaaactagtggcaatagttcaagaacaactcagaaaacgaaattatgaaggatttgga aaacttttggaagactgcatgcagaacgatcaagcaaagagtggtaccttggatgctgaggtcgtcagaaccattgtcca tgctcaccatgtacccttaccagatgatttactgagagctgccctttcattagctgtagcaaatgagcaaggagcaattg attacaaatccctgatagcccagatgaactggagggattcacctgtccccccaatgcaagtagaaccttcatcagatccc aactggcaggggacgtcacaaggaaacaacagtgtatccgtggtcaactatcagaatctccttgatgactgttttggaaa agctaaacctgagtcataa |
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Protein
| Protein ID | pfu_aug1.0_6337.1_31168.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6337.1_31168.t1 TLIRRHRIPKPAPNDDEYYTAEDFNIGKEINLYSKVFKITGSDDFTKNFLKKMGVRVNEAVDSPDNPYTKYRKAMDESMQ PLRPYEKHDTLKQFLDHDRHVLRFYCYWDDTDSMFGDPRELILHYFLADDTIEIREVIPANSGRDAVPMFLQRGKLPKNI ESLRQPGEITDRTVLNVFGPTGHGGRYILDSLKTGAVYTDFYRDSDLTLGAVLNVWGRKVLICDCDEFTKEYYRNKFGLE TFPSVEYKKDPMGMGPRQFPPYNGWGSEEDSLCSCMGLLPKPPKRDFIKFMEKDRRGLDSNVLRFLARMDTTKPIDMDRR FIISYFLSDDTILVFEPPVRNSGIIGGKFLERTRIKKPNQPLYSTDMSQYYLASDLHVGANVTFNSHKFVLIDADEYAFR YMEAHAGEFSKANINAILKKLVSIVGKNPDEVRSFFMKNDPKGCGTIGYDQLVSLLRQVDPTITNHEVMTVARYYSERTA EDAVDSRKLVAIVQEQLRKRNYEGFGKLLEDCMQNDQAKSGTLDAEVVRTIVHAHHVPLPDDLLRAALSLAVANEQGAID YKSLIAQMNWRDSPVPPMQVEPSSDPNWQGTSQGNNSVSVVNYQNLLDDCFGKAKPES |
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