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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_6340.1_09329
Locus scaffold6340.1 : 83756 ... 88795 : +
To GenomeBrowser scaffold6340.1:83756..88795
Genes list of scaffold scaffold6340.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_6340.1_09329.t1 1 1 7tm_1 18 267 5.9e-30 104.2 1.1e-33 8.4e-30 103.7

Transcript
Transcript IDpfu_aug1.0_6340.1_09329.t1
Definition-
>pfu_aug1.0_6340.1_09329.t1
atggaagctgcaattatgttgttttctgcgattttcctcttaagtttgattggcaacatcatcgtaatcttggttgttgt
caaagtggagggtatgaagaaccgaatgaacgtccttcttgcaaatttaagcatcgggagtttgggcgtgacaactttgt
gtatgcctttctttgcagctgaatatttattggcctccaattggatttttggtggatttttctgtaaaggcctccataca
atggagaatatcttcaccattggatgcatcctgaccgttggtgccatatcatacgaacggtatcttgggatatgttttcc
catgaatctctacacaagatggcgggcaacaagcatgaaaattgttattccatgcatatggtgcatgtcagttttgacaa
gcattcccacacttttctgtgtgagagagactgtcctcaaaatgagcacatacaaagtaacaatatgcaaccttaaaacc
gatgtgatcatacggaaattttatcatggattctactcaactctcattgttgtaacatttctttcctctgtttatctcat
atcacggatggtatttcgcctttgtcagggaaaaagtaagagtaagaaagtgattactgttctcatcttaatggcaacca
ttcatttatgttttcttttgccgcatcgcgtcctgctcgttttctttacatttctccctcaagaaacgtcaaggcttttt
ggctatcgtagctgctttattctatatgaatcttttcgctttggtgcatttctaaacttcgctttgaatccgatcattta
taattttgtatcctcaaaattcaaaaaggcttttaagcaactgtttcttaaacgaggaatacttcaaatatatgattttg
ttcgccgccgccgccgccgccgccgccgcactcatgatgacatcatatcgctcaaaagaatgaatgccattgatggtacc
atctgtgttacttcagtgtaa

Protein
Protein IDpfu_aug1.0_6340.1_09329.t1
Definition-
>pfu_aug1.0_6340.1_09329.t1
MEAAIMLFSAIFLLSLIGNIIVILVVVKVEGMKNRMNVLLANLSIGSLGVTTLCMPFFAAEYLLASNWIFGGFFCKGLHT
MENIFTIGCILTVGAISYERYLGICFPMNLYTRWRATSMKIVIPCIWCMSVLTSIPTLFCVRETVLKMSTYKVTICNLKT
DVIIRKFYHGFYSTLIVVTFLSSVYLISRMVFRLCQGKSKSKKVITVLILMATIHLCFLLPHRVLLVFFTFLPQETSRLF
GYRSCFILYESFRFGAFLNFALNPIIYNFVSSKFKKAFKQLFLKRGILQIYDFVRRRRRRRRRTHDDIISLKRMNAIDGT
ICVTSV

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