Gene
| Gene Model ID | pfu_aug1.0_6346.1_67423 |
|---|---|
| Locus | scaffold6346.1 : 10646 ... 19044 : + |
| To GenomeBrowser | scaffold6346.1:10646..19044 |
| Genes list of scaffold | scaffold6346.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6346.1_67423.t2 | 3 | 1 | Limkain-b1 | 25 | 41 | 3.9e-09 | 36.1 | 0.32 | 1600.0 | -1.1 |
| pfu_aug1.0_6346.1_67423.t2 | 3 | 2 | Limkain-b1 | 47 | 61 | 3.9e-09 | 36.1 | 0.86 | 4200.0 | -2.5 |
| pfu_aug1.0_6346.1_67423.t2 | 3 | 3 | Limkain-b1 | 111 | 156 | 3.9e-09 | 36.1 | 3.7e-12 | 1.8e-08 | 34.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6346.1_67423.t2 | gi|345484184|ref|XP_001600832.2| | 1.0e-28 |
Transcript
| Transcript ID | pfu_aug1.0_6346.1_67423.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6346.1_67423.t1 atgtcaaaccaactgccacccattggtgtattttgggacatagaaaattgttctgtacctaaatggaagtctgccttaag tgttgtccaactgatcagagagaagttcttcgctgaccacagggaagtggagtttatgtgtgtgtgtgatacaactaaag agagtaaagatgtaatacaggaactcaacaatgcacaggtcaatgtagtgcacataaatgccaccagcaagaacgcagct gatgataaattacgtcagagtctgcgacgttttgccgacaacaacactccccctgcttcccttgtcctcatctcgaatct ttcagacctgcgtcatcgtaaaaagtttaccgttattcttgtacacagtcgccatgttgcagaagccttaaagatatgtg ccactcatcattatgtttatgaagatttagttggggatcttccacagagaactgctgaagggaattctgatgacggcaca gagttggaagtttttgactaccctattcacatacctccaaagaaaatccaccgcagactgaagacgatctccgttaactg tggagggcgtgtcatcagcgtcacagagagggtagctgtcgtcagatttgcctgccataatgatgctgctaagtaa |
|
| Transcript ID | pfu_aug1.0_6346.1_67423.t2 |
| Definition | - |
>pfu_aug1.0_6346.1_67423.t2 atggatgtgaattgtgatagaatttataagttaaacaaggtcaatgtagtgcacataaatgccaccagcaagaacgcagc tgatgataaattacgtcagagtctgcgacgttttgccgacaacaacactccccctgcttcccttgtcctcatctcgaatc tttcagacctgcgtcatcgtaaaaagtttaccgttattcttgtacacagtcgccatgttgcagaagccttaaagatatgt gccactcatcattatgtttatgaagatttagttggggatcttccacagagaactgctgaagggaattctgatgacggcac agagttggaagtttttgactaccctattcacatacctccaaagaaaatccaccgcagactgaagacgatctccgttaact gtggagggcgtgtcatcagcgtcacagagagggtagctgtcgtcagatttgcctgccataatgatgctgctaagtaa |
|
Protein
| Protein ID | pfu_aug1.0_6346.1_67423.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6346.1_67423.t1 MSNQLPPIGVFWDIENCSVPKWKSALSVVQLIREKFFADHREVEFMCVCDTTKESKDVIQELNNAQVNVVHINATSKNAA DDKLRQSLRRFADNNTPPASLVLISNLSDLRHRKKFTVILVHSRHVAEALKICATHHYVYEDLVGDLPQRTAEGNSDDGT ELEVFDYPIHIPPKKIHRRLKTISVNCGGRVISVTERVAVVRFACHNDAAK |
|
| Protein ID | pfu_aug1.0_6346.1_67423.t2 |
| Definition | - |
>pfu_aug1.0_6346.1_67423.t2 MDVNCDRIYKLNKVNVVHINATSKNAADDKLRQSLRRFADNNTPPASLVLISNLSDLRHRKKFTVILVHSRHVAEALKIC ATHHYVYEDLVGDLPQRTAEGNSDDGTELEVFDYPIHIPPKKIHRRLKTISVNCGGRVISVTERVAVVRFACHNDAAK |
|